RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 TRPM3Q9HCF6 1732 aaPredicted RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 FANCIQ9NVI1 1328 aa7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 IRS4O14654 1257 aaPredicted RBP7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 RBM10P98175 930 aaKnown RBP7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 BVESQ8NE79 360 aa7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 ACTR10Q9NZ32 417 aa7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 MRVI1Q9Y6F6 885 aa7.37□□□□□ -1.23
CDKN1B-204ENST00000477087 CEMIPQ8WUJ3 1361 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 RGPD1P0DJD0 1748 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 ALS2Q96Q42 1657 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 NPHP3-ACAD11A0A0J9YXS1 232 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 F8W031 263 aaPredicted RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 SMAD7O15105 426 aaKnown RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 IPO8O15397 1037 aaKnown RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 BUB1BO60566 1050 aaPredicted RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 KCNH1O95259 989 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 INHBBP09529 407 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 NCKAP1LP55160 1127 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 ZC3H6P61129 1189 aaKnown RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 ZNF200P98182 395 aaPredicted RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 TAF7Q15545 349 aaPredicted RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 CNKSR3Q6P9H4 555 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 CPNE8Q86YQ8 564 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 PANK1Q8TE04 598 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 DDX17Q92841 729 aaKnown RBP7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 APEX2Q9UBZ4 518 aa7.36□□□□□ -1.23
CDKN1B-204ENST00000477087 OVOS2A0A0G2JMS6 1433 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 CRB1P82279 1406 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 PEAK1Q9H792 1746 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 WDR17Q8IZU2 1322 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 HSP90AB1P08238 724 aaKnown RBP7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 HOXB7P09629 217 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 BMP7P18075 431 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 EXOSC9Q06265 439 aaKnown RBP7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 LARP1BQ659C4 914 aaKnown RBP7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 TTLL10Q6ZVT0 673 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 IGDCC3Q8IVU1 814 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 TMEFF1Q8IYR6 380 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.235e-8■■■□□ 15.8
CDKN1B-204ENST00000477087 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 EMC9Q9Y3B6 208 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 RWDD3Q9Y3V2 267 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 PCDHA5Q9Y5H7 936 aa7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 XIRP1Q702N8 1843 aaKnown RBP7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 MARF1Q9Y4F3 1742 aaKnown RBP7.35□□□□□ -1.23
CDKN1B-204ENST00000477087 ZC3H12DA2A288 527 aaKnown RBP7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 NPHS1O60500 1241 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 FAM129CQ86XR2 697 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 USP33Q8TEY7 942 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 RAPGEF4Q8WZA2 1011 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 DACT3Q96B18 629 aaPredicted RBP7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 CHMP4BQ9H444 224 aaKnown RBP7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 PRDM11Q9NQV5 511 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 RAPGEFL1Q9UHV5 662 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
CDKN1B-204ENST00000477087 AHDC1Q5TGY3 1603 aaPredicted RBP7.34□□□□□ -1.24
CDKN1B-204ENST00000477087 FAM83GA6ND36 823 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 SCRN1Q12765 414 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 ZKSCAN2Q63HK3 967 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 IFNL2Q8IZJ0 200 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 NLGN1Q8N2Q7 840 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 ZNF513Q8N8E2 541 aaPredicted RBP7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 CLEC1BQ9P126 229 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 GULP1Q9UBP9 304 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
CDKN1B-204ENST00000477087 KIF16BQ96L93 1317 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 BCAR3O75815 825 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 GLI4P10075 376 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 PRR5P85299 388 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 TWISTNBQ3B726 338 aaPredicted RBP7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 SV2CQ496J9 727 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 LILRA6Q6PI73 481 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 C6orf15Q6UXA7 325 aaPredicted RBP7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 TRIM59Q8IWR1 403 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 FAM178BQ8IXR5 827 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 SSH1Q8WYL5 1049 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 ALG3Q92685 438 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 LTV1Q96GA3 475 aaPredicted RBP7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 PWWP2AQ96N64 755 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 EPB41L4AQ9HCS5 686 aaPredicted RBP7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 PARD6AQ9NPB6 346 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 LRP2BPQ9P2M1 347 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 PRKAG3Q9UGI9 489 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 FAN1Q9Y2M0 1017 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 THRAP3Q9Y2W1 955 aaKnown RBP7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 HCFC2Q9Y5Z7 792 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 HEG1Q9ULI3 1381 aa7.32□□□□□ -1.24
CDKN1B-204ENST00000477087 IRS2Q9Y4H2 1338 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 NHSL1Q5SYE7 1610 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 ERVV-2B6SEH9 535 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 RNMTO43148 476 aaKnown RBP7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 DDAH1O94760 285 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 PLS3P13797 630 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 ARID5AQ03989 594 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 FXNQ16595 210 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms