RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ATG7O95352 703 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 SYN1P17600 705 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 CDK7P50613 346 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 ZNF746Q6NUN9 644 aaPredicted RBP16.22■□□□□ 0.19
CCNL1-217ENST00000476367 FAM126BQ8IXS8 530 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 SLC43A3Q8NBI5 491 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 PCYT2Q99447 389 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 AZI2Q9H6S1 392 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 EMSYQ7Z589 1322 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 DCDC2CA8MYV0 355 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 HAS3O00219 553 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 B4GALT4O60513 344 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 OR52Z1P0C646 297 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 PPP2R5CQ13362 524 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 MIS18BP1Q6P0N0 1132 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 ANKRD33Q7Z3H0 272 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 CCDC60Q8IWA6 550 aaPredicted RBP16.21■□□□□ 0.19
CCNL1-217ENST00000476367 C7orf31Q8N865 590 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.19
CCNL1-217ENST00000476367 PDLIM7Q9NR12 457 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 TRMT13Q9NUP7 481 aaKnown RBP16.21■□□□□ 0.19
CCNL1-217ENST00000476367 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
CCNL1-217ENST00000476367 MORC2Q9Y6X9 1032 aaPredicted RBP16.21■□□□□ 0.19
CCNL1-217ENST00000476367 IGKV6D-21A0A0A0MT36 114 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 POTEMA6NI47 508 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 WDR64B1ANS9 1081 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 TLR3O15455 904 aaKnown RBP16.2■□□□□ 0.18
CCNL1-217ENST00000476367 LGR5O75473 907 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 CLTBP09497 229 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 PRPHP41219 470 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 TXKP42681 527 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 ABHD15Q6UXT9 468 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 MIER3Q7Z3K6 550 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
CCNL1-217ENST00000476367 IGSF22Q8N9C0 903 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
CCNL1-217ENST00000476367 TRPV6Q9H1D0 765 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 DISC1Q9NRI5 854 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
CCNL1-217ENST00000476367 FBXO2Q9UK22 296 aaPredicted RBP16.2■□□□□ 0.18
CCNL1-217ENST00000476367 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 FAM160B1Q5W0V3 765 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 SLFN12Q8IYM2 578 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 ERAP1Q9NZ08 941 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 RCOR1Q9UKL0 485 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 PCDHA12Q9UN75 941 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 PCDHA10Q9Y5I2 948 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 LAD1O00515 517 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 PSAPP07602 524 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 SMIM10L2AP0DMW4 78 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 SMIM10L2BP0DMW5 78 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 TECP42680 631 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 STAT5BP51692 787 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 JAK3P52333 1124 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 GDF6Q6KF10 455 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 SWSAP1Q6NVH7 229 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 TRMT1LQ7Z2T5 733 aaKnown RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 TOX2Q96NM4 488 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 SEZ6LQ9BYH1 1024 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 ZNF302Q9NR11 478 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-217ENST00000476367 PRKAG2Q9UGJ0 569 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
CCNL1-217ENST00000476367 PP2D1A8MPX8 630 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 H0YGN5 161 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 YEATS4O95619 227 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 CD4P01730 458 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 ATP4AP20648 1035 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 CDC25AP30304 524 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 SFNP31947 248 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 PTPN11Q06124 597 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-217ENST00000476367 UGCGQ16739 394 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-217ENST00000476367 ATL3Q6DD88 541 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 NCAPH2Q6IBW4 605 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 PDXDC2PQ6P474 469 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 USP49Q70CQ1 688 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 SESTD1Q86VW0 696 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-217ENST00000476367 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-217ENST00000476367 CLIC6Q96NY7 704 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 GDPD2Q9HCC8 539 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 GABBR1Q9UBS5 961 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 TANC1Q9C0D5 1861 aa16.18■□□□□ 0.18
CCNL1-217ENST00000476367 IGSF9BQ9UPX0 1349 aa16.17■□□□□ 0.18
CCNL1-217ENST00000476367 CYP2C9P11712 490 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms