RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 C7orf31Q8N865 590 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 RAD9AQ99638 391 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 LRFN3Q9BTN0 628 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 FCF1Q9Y324 198 aaKnown RBP12.14□□□□□ -0.47
CALD1-217ENST00000475772 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 CYTH3O43739 400 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 PPFIA4O75335 1185 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
CALD1-217ENST00000475772 HOXA13P31271 388 aaPredicted RBP12.13□□□□□ -0.47
CALD1-217ENST00000475772 PGM5Q15124 567 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 DBF4BQ8NFT6 615 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 C11orf16Q9NQ32 467 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
CALD1-217ENST00000475772 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 ZBTB5O15062 677 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 GGPS1O95749 300 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 HOXC8P31273 242 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 HTRA4P83105 476 aaPredicted RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 IKBKEQ14164 716 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 FAM117BQ6P1L5 589 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 SERINC5Q86VE9 423 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 TGS1Q96RS0 853 aaKnown RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 KATNAL1Q9BW62 490 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 KRT23Q9C075 422 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 RWDD1Q9H446 243 aaPredicted RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 RIOX1Q9H6W3 641 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
CALD1-217ENST00000475772 MTUS1Q9ULD2 1270 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
CALD1-217ENST00000475772 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 LGR5O75473 907 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 UBA1P22314 1058 aaKnown RBP12.11□□□□□ -0.47
CALD1-217ENST00000475772 PLA2G5P39877 138 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
CALD1-217ENST00000475772 SEMA3FQ13275 785 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 PLEKHG4Q58EX7 1191 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 IFIT1BQ5T764 474 aaKnown RBP12.11□□□□□ -0.47
CALD1-217ENST00000475772 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
CALD1-217ENST00000475772 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 PIGSQ96S52 555 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 RNPEPQ9H4A4 650 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 ATG2AQ2TAZ0 1938 aa12.11□□□□□ -0.47
CALD1-217ENST00000475772 RSPH10B2B2RC85 870 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 TREHO43280 583 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 RSPH10BP0C881 870 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 TGFB3P10600 412 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 PRKD2Q9BZL6 878 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 CTNNA3Q9UI47 895 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
CALD1-217ENST00000475772 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.09□□□□□ -0.47
CALD1-217ENST00000475772 H3BRB1 525 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 HIP1O00291 1037 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 EFCAB14O75071 495 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 LGALS2P05162 132 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 CYP21A2P08686 494 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 ICAM3P32942 547 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 THPOP40225 353 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 ADAM17P78536 824 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 PTH1RQ03431 593 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 TROAPQ12815 778 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 GRM4Q14833 912 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 FCHSD1Q86WN1 690 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 EXOC6Q8TAG9 804 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 TOP1MTQ969P6 601 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
CALD1-217ENST00000475772 UBE2ZQ9H832 354 aaPredicted RBP12.09□□□□□ -0.47
CALD1-217ENST00000475772 CNNM2Q9H8M5 875 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 INSL6Q9Y581 213 aa12.09□□□□□ -0.47
CALD1-217ENST00000475772 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
CALD1-217ENST00000475772 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 PI4K2BG5E9Z4 385 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 GCOM1H8Y6P7 765 aaPredicted RBP12.08□□□□□ -0.48
CALD1-217ENST00000475772 GPR37L1O60883 481 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 POLR2MP0CAP2 368 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 SMIM10L2AP0DMW4 78 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 SMIM10L2BP0DMW5 78 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 GSPT1P15170 499 aaKnown RBP12.08□□□□□ -0.48
CALD1-217ENST00000475772 IL9P15248 144 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 AAMPQ13685 434 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 LEXMQ3ZCV2 418 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 LIAT1Q6ZQX7 453 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 FAM178BQ8IXR5 827 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 MYOCDQ8IZQ8 938 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms