RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 AGBL1Q96MI9 1066 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 MTMR9Q96QG7 549 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 RIT2Q99578 217 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 NT5C3AQ9H0P0 336 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 NUP62CLQ9H1M0 184 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 TNMDQ9H2S6 317 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 GDPD2Q9HCC8 539 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 TBC1D22BQ9NU19 505 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 FBXO2Q9UK22 296 aaPredicted RBP7.9□□□□□ -1.14
SHQ1-207ENST00000475558 KCNH3Q9ULD8 1083 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 NCOR1O75376 2440 aa7.9□□□□□ -1.15
SHQ1-207ENST00000475558 ZNFX1Q9P2E3 1918 aaKnown RBP7.9□□□□□ -1.15
SHQ1-207ENST00000475558 MEIS1O00470 390 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 DKC1O60832 514 aaKnown RBP eCLIP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 DTNBO60941 627 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 GADD45BO75293 160 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 SMC2O95347 1197 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 CCDC192P0DO97 292 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 TGFB3P10600 412 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 COL9A1P20849 921 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 DNAJB2P25686 324 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 FPGSQ05932 587 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 PLS1Q14651 629 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 GRIN2CQ14957 1233 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM132BQ14DG7 1078 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 GNPTABQ3T906 1256 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 CEP55Q53EZ4 464 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 ARHGEF16Q5VV41 709 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 KRT79Q5XKE5 535 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 SASS6Q6UVJ0 657 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 NCAPG2Q86XI2 1143 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 CEP57L1Q8IYX8 460 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 ANKRD35Q8N283 1001 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 GIMAP8Q8ND71 665 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 ENGASEQ8NFI3 743 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 GPT2Q8TD30 523 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 SYTL5Q8TDW5 730 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 CRYGNQ8WXF5 182 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 CCDC47Q96A33 483 aaKnown RBP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 MAML3Q96JK9 1138 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 RMDN3Q96TC7 470 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 MXRA8Q9BRK3 442 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 WDR11Q9BZH6 1224 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 NAT10Q9H0A0 1025 aaKnown RBP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 XPNPEP3Q9NQH7 507 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 RNF146Q9NTX7 359 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM39AQ9NV64 488 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 DACT1Q9NYF0 836 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 TCEAL9Q9UHQ7 104 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-207ENST00000475558 HPSEQ9Y251 543 aa7.89□□□□□ -1.15
SHQ1-207ENST00000475558 SPTBN5Q9NRC6 3674 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 VWA3AA6NCI4 1184 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 DCDC2CA8MYV0 355 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 EIF3JO75822 258 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 SLFN14P0C7P3 912 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 ITGB8P26012 769 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 CCND2P30279 289 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 EPHB4P54760 987 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 RPS6P62753 249 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 SNW1Q13573 536 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 BAATQ14032 418 aaPredicted RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 KCTD2Q14681 263 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 STXBP2Q15833 593 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 UBE2SQ16763 222 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 EARS2Q5JPH6 523 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 RRAGBQ5VZM2 374 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 HAUS3Q68CZ6 603 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 CAVIN1Q6NZI2 390 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 THSD4Q6ZMP0 1018 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 RASGRP2Q7LDG7 609 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 VSIG10LQ86VR7 867 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 FCHSD1Q86WN1 690 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 FMR1NBQ8N0W7 255 aaPredicted RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 CNNM3Q8NE01 707 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 RDM1Q8NG50 284 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 RASGRP4Q8TDF6 673 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 ATXN2LQ8WWM7 1075 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 WNT2BQ93097 391 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 TIFAQ96CG3 184 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 TOX2Q96NM4 488 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 GAS2L1Q99501 681 aaPredicted RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 TSEN34Q9BSV6 310 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 CSRNP2Q9H175 543 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 CLSTN2Q9H4D0 955 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 ZNF576Q9H609 170 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 JADE2Q9NQC1 790 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 RYDENQ9NUL5 291 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM260Q9NX78 707 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 LRWD1Q9UFC0 647 aa7.88□□□□□ -1.15
SHQ1-207ENST00000475558 DIS3Q9Y2L1 958 aaKnown RBP7.88□□□□□ -1.15
SHQ1-207ENST00000475558 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 A0A1B0GVL5 298 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 A0A1W2PQ45 241 aaPredicted RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 A0A1W2PQY0 241 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 ASB14A6NK59 587 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 OPLAHO14841 1288 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms