RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 KCTD19Q17RG1 926 aaPredicted RBP12.82□□□□□ -0.36
FXR1-211ENST00000475315 CCDC84Q86UT8 332 aaPredicted RBP12.82□□□□□ -0.36
FXR1-211ENST00000475315 TAF4BQ92750 862 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 RPS6KC1Q96S38 1066 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 FAM114A2Q9NRY5 505 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 O00370 1275 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 ZSCAN9O15535 394 aaPredicted RBP12.82□□□□□ -0.36
FXR1-211ENST00000475315 PDHA1P08559 390 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 ACADSP16219 412 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 SKIV2L2P42285 1042 aaKnown RBP12.82□□□□□ -0.36
FXR1-211ENST00000475315 PEX5P50542 639 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 USP4Q13107 963 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 SEC23AQ15436 765 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 CNGA2Q16280 664 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 MAN2A1Q16706 1144 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 COBLL1Q53SF7 1204 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 TNFAIP8L3Q5GJ75 292 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 HHATQ5VTY9 493 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 FOXB2Q5VYV0 432 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 TMEM154Q6P9G4 183 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 FITM2Q8N6M3 262 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 FAM136AQ96C01 138 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 NAPBQ9H115 298 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 SEMA6BQ9H3T3 888 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 SLC52A2Q9HAB3 445 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.82□□□□□ -0.36
FXR1-211ENST00000475315 PRKAG3Q9UGI9 489 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 AMACRQ9UHK6 382 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 ATP8A1Q9Y2Q0 1164 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 DOCK2Q92608 1830 aa12.82□□□□□ -0.36
FXR1-211ENST00000475315 ABCB11O95342 1321 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 ATAD5Q96QE3 1844 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 PGRMC1O00264 195 aaKnown RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 ADAMTS3O15072 1205 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 TTI1O43156 1089 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 CEP104O60308 925 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 GBP1P32455 592 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 KLC1Q07866 573 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 C1QTNF12Q5T7M4 302 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 RNF220Q5VTB9 566 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 DZIP3Q86Y13 1208 aaKnown RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 ANKLE1Q8NAG6 615 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 PHC3Q8NDX5 983 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 SYN2Q92777 582 aaPredicted RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 DTNBP1Q96EV8 351 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 ZNF512BQ96KM6 892 aaPredicted RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.361e-10■■□□□ 12.6
FXR1-211ENST00000475315 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 NOC2LQ9Y3T9 749 aaKnown RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
FXR1-211ENST00000475315 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
FXR1-211ENST00000475315 SUN1O94901 812 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 AGTP01019 485 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 SERPING1P05155 500 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 ITGA4P13612 1032 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PCK1P35558 622 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 RFC5P40937 340 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 LMNB2Q03252 620 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 KCNMA1Q12791 1236 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 SLC18A3Q16572 532 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 SLC9C1Q4G0N8 1177 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 LRRC23Q53EV4 343 aaPredicted RBP12.8□□□□□ -0.36
FXR1-211ENST00000475315 TDRD12Q587J7 1177 aaKnown RBP12.8□□□□□ -0.36
FXR1-211ENST00000475315 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 CENPPQ6IPU0 288 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PIK3AP1Q6ZUJ8 805 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 RASGEF1CQ8N431 466 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 STK32AQ8WU08 396 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
FXR1-211ENST00000475315 TRAPPC9Q96Q05 1148 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
FXR1-211ENST00000475315 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PP2D1A8MPX8 630 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 GSG1L2A8MUP6 293 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PLEKHA8P1O95397 391 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 FCER1AP12319 257 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PPP1R2P41236 205 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 IFNAR2P48551 515 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 RAD23BP54727 409 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PABPC1LQ4VXU2 614 aaKnown RBP12.8□□□□□ -0.36
FXR1-211ENST00000475315 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 ENDOVQ8N8Q3 282 aaKnown RBP12.8□□□□□ -0.36
FXR1-211ENST00000475315 LRRC57Q8N9N7 239 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 ASAP3Q8TDY4 903 aa12.8□□□□□ -0.36
FXR1-211ENST00000475315 PLEKHG4BQ96PX9 1271 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms