RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 IFNAR1P17181 557 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 PDIA3P30101 505 aaKnown RBP18.42■□□□□ 0.54
ITGB5-205ENST00000474838 NTRK3Q16288 839 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.42■□□□□ 0.54
ITGB5-205ENST00000474838 RSPH3Q86UC2 560 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 CCDC148Q8NFR7 591 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 MYO9BQ13459 2157 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 RRN3P2A6NIE6 340 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 RBAK-RBAKDNI3L0D1 243 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 RFXAPO00287 272 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 RPLP2P05387 115 aaKnown RBP18.41■□□□□ 0.54
ITGB5-205ENST00000474838 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 GNA11P29992 359 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
ITGB5-205ENST00000474838 TJAP1Q5JTD0 557 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 MARCH8Q5T0T0 291 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 FAM117BQ6P1L5 589 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 PLPPR4Q7Z2D5 763 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 SPRED2Q7Z698 418 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 PLA2G4DQ86XP0 818 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 MICALL1Q8N3F8 863 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 ATXN2LQ8WWM7 1075 aaKnown RBP18.41■□□□□ 0.54
ITGB5-205ENST00000474838 SYMPKQ92797 1274 aaKnown RBP18.41■□□□□ 0.54
ITGB5-205ENST00000474838 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
ITGB5-205ENST00000474838 IFIH1Q9BYX4 1025 aaKnown RBP18.41■□□□□ 0.54
ITGB5-205ENST00000474838 OSBPL7Q9BZF2 842 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 INSL6Q9Y581 213 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 MTCH2Q9Y6C9 303 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 TRANK1O15050 2925 aa18.41■□□□□ 0.54
ITGB5-205ENST00000474838 IGLV3-22A0A075B6J6 115 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 LINC01553A4QN01 128 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 ATG7O95352 703 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 CHRNA1P02708 482 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 INSRRP14616 1297 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 IGBP1P78318 339 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
ITGB5-205ENST00000474838 MGAT3Q09327 533 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 SLC26A6Q9BXS9 759 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 NCOA5Q9HCD5 579 aaKnown RBP18.4■□□□□ 0.54
ITGB5-205ENST00000474838 TRPC6Q9Y210 931 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 COL4A6Q14031 1691 aa18.4■□□□□ 0.54
ITGB5-205ENST00000474838 SIP14410 1827 aa18.39■□□□□ 0.54
ITGB5-205ENST00000474838 ADAMTS3O15072 1205 aa18.39■□□□□ 0.53
ITGB5-205ENST00000474838 CCNE2O96020 404 aa18.39■□□□□ 0.53
ITGB5-205ENST00000474838 SLC26A2P50443 739 aa18.39■□□□□ 0.53
ITGB5-205ENST00000474838 STAT5BP51692 787 aa18.39■□□□□ 0.53
ITGB5-205ENST00000474838 CCT2P78371 535 aaKnown RBP18.39■□□□□ 0.53
ITGB5-205ENST00000474838 HTRA4P83105 476 aaPredicted RBP18.39■□□□□ 0.53
ITGB5-205ENST00000474838 GRB10Q13322 594 aa18.39■□□□□ 0.53
ITGB5-205ENST00000474838 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
ITGB5-205ENST00000474838 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
ITGB5-205ENST00000474838 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
ITGB5-205ENST00000474838 IGKV6D-21A0A0A0MT36 114 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
ITGB5-205ENST00000474838 DDX39AO00148 427 aaKnown RBP18.38■□□□□ 0.53
ITGB5-205ENST00000474838 IPO5O00410 1097 aaKnown RBP18.38■□□□□ 0.53
ITGB5-205ENST00000474838 LPXNO60711 386 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 GHRP10912 638 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 ERVK-21P61565 698 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 SP7Q8TDD2 431 aaPredicted RBP18.38■□□□□ 0.53
ITGB5-205ENST00000474838 DNAJB3Q8WWF6 145 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 SH3GLB2Q9NR46 395 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 VPS54Q9P1Q0 977 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 KAT6AQ92794 2004 aa18.38■□□□□ 0.53
ITGB5-205ENST00000474838 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 BACH1O14867 736 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 DHX15O43143 795 aaKnown RBP18.37■□□□□ 0.53
ITGB5-205ENST00000474838 MRPS5P82675 430 aaKnown RBP18.37■□□□□ 0.53
ITGB5-205ENST00000474838 MRPS6P82932 125 aaKnown RBP18.37■□□□□ 0.53
ITGB5-205ENST00000474838 LPIN1Q14693 890 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 ABHD15Q6UXT9 468 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 RASGRP4Q8TDF6 673 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 GDPD5Q8WTR4 605 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 TOP1MTQ969P6 601 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
ITGB5-205ENST00000474838 ASB2Q96Q27 587 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 ZNF577Q9BSK1 485 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
ITGB5-205ENST00000474838 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
ITGB5-205ENST00000474838 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 MTUS1Q9ULD2 1270 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 CDY2AQ9Y6F7 541 aa18.37■□□□□ 0.53
ITGB5-205ENST00000474838 CIITAP33076 1130 aa18.36■□□□□ 0.53
ITGB5-205ENST00000474838 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
ITGB5-205ENST00000474838 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
ITGB5-205ENST00000474838 KRT40Q6A162 431 aa18.36■□□□□ 0.53
ITGB5-205ENST00000474838 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
ITGB5-205ENST00000474838 TSHZ1Q6ZSZ6 1077 aa18.36■□□□□ 0.53
ITGB5-205ENST00000474838 CCDC60Q8IWA6 550 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms