RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ISCA1Q9BUE6 129 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 IFIH1Q9BYX4 1025 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 RXFP1Q9HBX9 757 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP16-205ENST00000474835 ACTL7BQ9Y614 415 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 ZNF804BA4D1E1 1349 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 PRAMEF22A3QJZ6 481 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 STXBP3O00186 592 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CASQ2O14958 399 aaPredicted RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 NPHP1O15259 732 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 RAD51CO43502 376 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PDE8AO60658 829 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 UNC5CO95185 931 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CRABP2P29373 138 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 GTF2H1P32780 548 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PRCPP42785 496 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 TRAPPC10P48553 1259 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 MAP3K10Q02779 954 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CDK18Q07002 472 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 TTLL12Q14166 644 aaPredicted RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 MPP2Q14168 576 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 NKX1-1Q15270 411 aaPredicted RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 WASHC2DQ5SRD0 308 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 OTUD7BQ6GQQ9 843 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CAPRIN2Q6IMN6 1127 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 GRAMD1CQ8IYS0 662 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CHAC2Q8WUX2 184 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 SAAL1Q96ER3 474 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 DHTKD1Q96HY7 919 aaPredicted RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 DHX36Q9H2U1 1008 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 PDZD7Q9H5P4 517 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 SPATS2LQ9NUQ6 558 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 PAG1Q9NWQ8 432 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PCYOX1Q9UHG3 505 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 INTUQ9ULD6 942 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 ANGEL1Q9UNK9 670 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 HYOU1Q9Y4L1 999 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 SNED1Q8TER0 1413 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 A0A088AWK7 358 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 KCNJ18B7U540 433 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 VILLO15195 856 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PARP1P09874 1014 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 CSB-PGBD3P0DP91 1061 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 RARGP13631 454 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 TXKP42681 527 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CD97P48960 835 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 USP11P51784 963 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 RAP1GDS1P52306 607 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 MRPS35P82673 323 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 GSTM4Q03013 218 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 KCNJ12Q14500 433 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 UBE3CQ15386 1083 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 WDR72Q3MJ13 1102 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 NOP9Q86U38 636 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 TRMT44Q8IYL2 757 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 KIAA0895Q8NCT3 520 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 LZICQ8WZA0 190 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 KIFAP3Q92845 792 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CHMP6Q96FZ7 201 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 LZTS2Q9BRK4 669 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 MAGEF1Q9HAY2 307 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 ABCF3Q9NUQ8 709 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 EHD2Q9NZN4 543 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 TUBGCP4Q9UGJ1 667 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 RIPOR2Q9Y4F9 1068 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PCDHA13Q9Y5I0 950 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 ATRNL1Q5VV63 1379 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 A8MUI8 341 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 FGFR1P11362 822 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PEX5P50542 639 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CYP4A11Q02928 519 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 SCARF1Q14162 830 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 TSNAXIP1Q2TAA8 658 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CWF19L2Q2TBE0 894 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 CCDC178Q5BJE1 867 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 HDGFL1Q5TGJ6 251 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 PDXDC1Q6P996 788 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 ARHGAP22Q7Z5H3 698 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 CKAP2Q8WWK9 683 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 RSPH1Q8WYR4 309 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 NAF1Q96HR8 494 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 C8orf76Q96K31 380 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 GDAP1L1Q96MZ0 367 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 NR1H4Q96RI1 486 aaPredicted RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 RNF26Q9BY78 433 aaPredicted RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 PUS3Q9BZE2 481 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 PUS7LQ9H0K6 701 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 RANBP17Q9H2T7 1088 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 SEMA6BQ9H3T3 888 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 SSU72Q9NP77 194 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 PAPOLBQ9NRJ5 636 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 DNAAF2Q9NVR5 837 aaKnown RBP4.51□□□□□ -1.69
USP16-205ENST00000474835 TBCCD1Q9NVR7 557 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 ATXN10Q9UBB4 475 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 TBX22Q9Y458 520 aa4.51□□□□□ -1.69
USP16-205ENST00000474835 A0A0G2JS52 829 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SOBPA7XYQ1 873 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 CAPN14A8MX76 684 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 EXOC3O60645 756 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms