RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 UTP14CQ5TAP6 766 aaKnown RBP19.1■□□□□ 0.65
SCAF11-206ENST00000474828 SH3RF1Q7Z6J0 888 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 C7orf31Q8N865 590 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 AZI2Q9H6S1 392 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 MBLAC1A4D2B0 266 aaPredicted RBP19.09■□□□□ 0.65
SCAF11-206ENST00000474828 H0YGN5 161 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 EML1O00423 815 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 LAD1O00515 517 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 STBD1O95210 358 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
SCAF11-206ENST00000474828 SMIM10L2AP0DMW4 78 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 SMIM10L2BP0DMW5 78 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 MCM7P33993 719 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 PLCB4Q15147 1175 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 FAM160B1Q5W0V3 765 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 SWSAP1Q6NVH7 229 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 SERINC5Q86VE9 423 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 GLG1Q92896 1179 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 PRO3102Q9H379 93 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 ZNF302Q9NR11 478 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 TRMT13Q9NUP7 481 aaKnown RBP19.09■□□□□ 0.65
SCAF11-206ENST00000474828 PCDHA12Q9UN75 941 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 PCDHB6Q9Y5E3 794 aa19.09■□□□□ 0.65
SCAF11-206ENST00000474828 MORC2Q9Y6X9 1032 aaPredicted RBP19.09■□□□□ 0.65
SCAF11-206ENST00000474828 ZNF862O60290 1169 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 ITGB8P26012 769 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 PRPHP41219 470 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 EPHA7Q15375 998 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 ZNF174Q15697 407 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 TRIM71Q2Q1W2 868 aaKnown RBP19.08■□□□□ 0.64
SCAF11-206ENST00000474828 MARCH8Q5T0T0 291 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 MCTP1Q6DN14 999 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 RPAINQ86UA6 219 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 ATP8B4Q8TF62 1192 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 TNPO1Q92973 898 aaKnown RBP19.08■□□□□ 0.64
SCAF11-206ENST00000474828 HSD17B14Q9BPX1 270 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 NOC4LQ9BVI4 516 aaKnown RBP19.08■□□□□ 0.64
SCAF11-206ENST00000474828 TTC12Q9H892 705 aaPredicted RBP19.08■□□□□ 0.64
SCAF11-206ENST00000474828 TCEAL9Q9UHQ7 104 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 LTBP2Q14767 1821 aa19.08■□□□□ 0.64
SCAF11-206ENST00000474828 VPS37CA5D8V6 355 aaPredicted RBP19.07■□□□□ 0.64
SCAF11-206ENST00000474828 ZBTB42B2RXF5 422 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 TIMP1P01033 207 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 OR52Z1P0C646 297 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 FXR2P51116 673 aaKnown RBP eCLIP19.07■□□□□ 0.643e-9■■■□□ 15.9
SCAF11-206ENST00000474828 ATP2C1P98194 919 aaPredicted RBP19.07■□□□□ 0.64
SCAF11-206ENST00000474828 PTK7Q13308 1070 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 NBR1Q14596 966 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 PTGISQ16647 500 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 MIER3Q7Z3K6 550 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 LMBR1Q8WVP7 490 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 GDF15Q99988 308 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 ZSCAN16Q9H4T2 348 aaPredicted RBP19.07■□□□□ 0.64
SCAF11-206ENST00000474828 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 TMEM39AQ9NV64 488 aa19.07■□□□□ 0.64
SCAF11-206ENST00000474828 COL1A2P08123 1366 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 RANBP2P49792 3224 aaKnown RBP19.06■□□□□ 0.64
SCAF11-206ENST00000474828 POTEB3A0JP26 581 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 C17orf102A2RUQ5 167 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 RRN3P2A6NIE6 340 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 HBP1O60381 514 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 GNAT1P11488 350 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 PTGDRQ13258 359 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 UGCGQ16739 394 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 FAM47CQ5HY64 1035 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 PDXDC2PQ6P474 469 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 POTEBQ6S5H4 581 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 PPP1R13LQ8WUF5 828 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 BBXQ8WY36 941 aaPredicted RBP19.06■□□□□ 0.64
SCAF11-206ENST00000474828 DHX38Q92620 1227 aaKnown RBP19.06■□□□□ 0.64
SCAF11-206ENST00000474828 GABBR1Q9UBS5 961 aa19.06■□□□□ 0.64
SCAF11-206ENST00000474828 BACH1O14867 736 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 LYPLA2O95372 231 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 P4HBP07237 508 aaKnown RBP19.05■□□□□ 0.64
SCAF11-206ENST00000474828 INSRRP14616 1297 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 ATP2B1P20020 1258 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 BMP8BP34820 402 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 TXKP42681 527 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 BECN1Q14457 450 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 PDIA5Q14554 519 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 TARBP2Q15633 366 aaKnown RBP19.05■□□□□ 0.64
SCAF11-206ENST00000474828 GRIK4Q16099 956 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 ARL6IP4Q66PJ3 421 aaKnown RBP19.05■□□□□ 0.64
SCAF11-206ENST00000474828 IGSF22Q8N9C0 903 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 CAGE1Q8TC20 777 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 NEK9Q8TD19 979 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 ATP6V0A1Q93050 837 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 FAM167AQ96KS9 214 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 CEP89Q96ST8 783 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 NIFKQ9BYG3 293 aaKnown RBP19.05■□□□□ 0.64
SCAF11-206ENST00000474828 SETD4Q9NVD3 440 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 COLQQ9Y215 455 aaPredicted RBP19.05■□□□□ 0.64
SCAF11-206ENST00000474828 WDR81Q562E7 1941 aa19.05■□□□□ 0.64
SCAF11-206ENST00000474828 CEP290O15078 2479 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 CHMP2AO43633 222 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 CAND2O75155 1236 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 SLITRK3O94933 977 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 BMP15O95972 392 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms