RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GTPBP4Q9BZE4 634 aaKnown RBP7.42□□□□□ -1.22
ATG4A-207ENST00000474825 TRIM9Q9C026 710 aa7.42□□□□□ -1.22
ATG4A-207ENST00000474825 R3HDMLQ9H3Y0 253 aa7.42□□□□□ -1.22
ATG4A-207ENST00000474825 ADD3Q9UEY8 706 aaKnown RBP7.42□□□□□ -1.22
ATG4A-207ENST00000474825 MAN1B1Q9UKM7 699 aa7.42□□□□□ -1.22
ATG4A-207ENST00000474825 COL11A1P12107 1806 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-207ENST00000474825 NFASCO94856 1347 aa7.42□□□□□ -1.22
ATG4A-207ENST00000474825 PVALEFA0A1B0GWK0 134 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 IGF2BP3O00425 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 IKBKBO14920 756 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 MARCH6O60337 910 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 PEX10O60683 326 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ATP9AO75110 1047 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 MED24O75448 989 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 RHOBTB3O94955 611 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 TGFB3P10600 412 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 KCNA2P16389 499 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ZNF165P49910 485 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 SLC12A3P55017 1021 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 UBXN2AP68543 259 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 CCNA1P78396 465 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 AMPD3Q01432 767 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 CNTN2Q02246 1040 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 EHHADHQ08426 723 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 MTMR1Q13613 665 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 CUL4BQ13620 913 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 PLS1Q14651 629 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 NCAPHQ15003 741 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 STXBP2Q15833 593 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 DPCR1Q3MIW9 517 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ANO6Q4KMQ2 910 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 LRCH2Q5VUJ6 765 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 CYP4F22Q6NT55 531 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 C17orf99Q6UX52 265 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 KCNK18Q7Z418 384 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 NLRX1Q86UT6 975 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 NCAPG2Q86XI2 1143 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 GRAMD1CQ8IYS0 662 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ANKRD35Q8N283 1001 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 SYT2Q8N9I0 419 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ERMNQ8TAM6 284 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 LARP4BQ92615 738 aaKnown RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 ERCC4Q92889 916 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 DNAJC19Q96DA6 116 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 EIF2AK1Q9BQI3 630 aaKnown RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 PAGR1Q9BTK6 254 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 TEKT3Q9BXF9 490 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 LRRC27Q9C0I9 530 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 DNAJC25Q9H1X3 360 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 PORCNQ9H237 461 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 UNC45AQ9H3U1 944 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 CBX8Q9HC52 389 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 DIS3Q9Y2L1 958 aaKnown RBP7.41□□□□□ -1.22
ATG4A-207ENST00000474825 PCDHGA10Q9Y5H3 936 aa7.41□□□□□ -1.22
ATG4A-207ENST00000474825 FRMD3A2A2Y4 597 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 MYMKA6NI61 221 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 B4DLN1 442 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 GAS7O60861 476 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 ATG7O95352 703 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 IGHA2P01877 340 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 RPN1P04843 607 aaKnown RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 FCER1AP12319 257 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 ERCC5P28715 1186 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 SFNP31947 248 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 CCT6AP40227 531 aaKnown RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 AFMP43652 599 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 LBX1P52954 281 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 KRT76Q01546 638 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 IRF5Q13568 498 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 GRB14Q14449 540 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 KCTD2Q14681 263 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 ZNF658Q5TYW1 1059 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 NCAPH2Q6IBW4 605 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 ZNF746Q6NUN9 644 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 FOXR2Q6PJQ5 311 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 MAMDC4Q6UXC1 1216 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 C11orf57Q6ZUT1 292 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 SV2BQ7L1I2 683 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 DHX40Q8IX18 779 aaKnown RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 SMCR8Q8TEV9 937 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 PDLIM2Q96JY6 352 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 MMP19Q99542 508 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 NAT10Q9H0A0 1025 aaKnown RBP7.4□□□□□ -1.22
ATG4A-207ENST00000474825 RMND1Q9NWS8 449 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
ATG4A-207ENST00000474825 LCTP09848 1927 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 IGKV6D-21A0A0A0MT36 114 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 RBM47A0AV96 593 aaKnown RBP7.39□□□□□ -1.23
ATG4A-207ENST00000474825 CA12O43570 354 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 TLR2O60603 784 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 EYA4O95677 639 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 CCNE2O96020 404 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 P4HBP07237 508 aaKnown RBP7.39□□□□□ -1.23
ATG4A-207ENST00000474825 HOXC6P09630 235 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 PLA2G4BP0C869 781 aa7.39□□□□□ -1.23
ATG4A-207ENST00000474825 MYCLP12524 364 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms