RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ATP6V0A1Q93050 837 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 EMID1Q96A84 441 aaPredicted RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 CCDC34Q96HJ3 373 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 DYDC2Q96IM9 177 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 GPR20Q99678 358 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 MMTAG2Q9BU76 263 aaKnown RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 AZI2Q9H6S1 392 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 BCAS3Q9H6U6 928 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 TUFT1Q9NNX1 390 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 ZNF302Q9NR11 478 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 DDX19AQ9NUU7 478 aaKnown RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 GABBR1Q9UBS5 961 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 HPSEQ9Y251 543 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 PCDHA10Q9Y5I2 948 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 KIAA0100Q14667 2235 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 EMSYQ7Z589 1322 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 SYNRGQ9UMZ2 1314 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 CITO14578 2027 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 A0A087X0B3 334 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 FAM237AA0A1B0GTK4 181 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 DUSP11O75319 330 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 NR1I2O75469 434 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 P4HBP07237 508 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 MMP3P08254 477 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 QARSP47897 775 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 CPT1AP50416 773 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 PSMC5P62195 406 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 GRB10Q13322 594 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 KLHL40Q2TBA0 621 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 HSDL1Q3SXM5 330 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 TMEM119Q4V9L6 283 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 BRDTQ58F21 947 aaPredicted RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 UTP14CQ5TAP6 766 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 CCDC60Q8IWA6 550 aaPredicted RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 CKAP2LQ8IYA6 745 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 IQUBQ8NA54 791 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 CNNM3Q8NE01 707 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 AFG1LQ8WV93 481 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 SEPT1Q8WYJ6 367 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 GLG1Q92896 1179 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 PANK2Q9BZ23 570 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 DACT1Q9NYF0 836 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 RGL1Q9NZL6 768 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 STK17AQ9UEE5 414 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 DDX20Q9UHI6 824 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 ZNF215Q9UL58 517 aaPredicted RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
CNN3-205ENST00000474409 TELO2Q9Y4R8 837 aa9.33□□□□□ -0.92
CNN3-205ENST00000474409 TRIP11Q15643 1979 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 GSTTP1A0A1W2PQM5 241 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 DYNC1LI2O43237 492 aaPredicted RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 TRAK2O60296 914 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 MSCO60682 206 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 ZNF202O95125 648 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 MYCNP04198 464 aaPredicted RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 SSBP05455 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNN3-205ENST00000474409 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 ZNF286BP0CG31 522 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 SPATA31C1P0DKV0 1188 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 MUTP22033 750 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 PRKCEQ02156 737 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 ECM1Q16610 540 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 UGCGQ16739 394 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 DGKDQ16760 1214 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 HYIQ5T013 277 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 MAP3K21Q5TCX8 1036 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 SWSAP1Q6NVH7 229 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 PDXDC2PQ6P474 469 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 FBXO46Q6PJ61 603 aaPredicted RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 ABHD15Q6UXT9 468 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 LARP4BQ92615 738 aaKnown RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 RAD54LQ92698 747 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNN3-205ENST00000474409 NUP62CLQ9H1M0 184 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 CUEDC2Q9H467 287 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 ZSWIM4Q9H7M6 989 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 MAGEF1Q9HAY2 307 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 XPNPEP3Q9NQH7 507 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 SEPT9Q9UHD8 586 aaPredicted RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
CNN3-205ENST00000474409 Q9Y3F1 56 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 HTTP42858 3142 aa9.32□□□□□ -0.92
CNN3-205ENST00000474409 ARHGEF35A5YM69 484 aa9.31□□□□□ -0.92
CNN3-205ENST00000474409 E9PMD0 336 aa9.31□□□□□ -0.92
CNN3-205ENST00000474409 ACTN4O43707 911 aaKnown RBP9.31□□□□□ -0.92
CNN3-205ENST00000474409 ZEB2O60315 1214 aa9.31□□□□□ -0.92
CNN3-205ENST00000474409 SLITRK3O94933 977 aa9.31□□□□□ -0.92
CNN3-205ENST00000474409 ATG7O95352 703 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms