RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 AHI1Q8N157 1196 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 PPM1KQ8N3J5 372 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 SLC7A14Q8TBB6 771 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 MFSD3Q96ES6 412 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 WRNIP1Q96S55 665 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 ZNF747Q9BV97 191 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 CATSPERZQ9NTU4 200 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 ASH2LQ9UBL3 628 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 PRKAB1Q9Y478 270 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 PCDHA9Q9Y5H5 950 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 CCDC66A2RUB6 948 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 ASGR2P07307 311 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 CYP2C8P10632 490 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 EPHA5P54756 1037 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 NKX3-2P78367 333 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 LACTBP83111 547 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 CACNB2Q08289 660 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 ZCCHC8Q6NZY4 707 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 KCTD1Q719H9 257 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 B3GNT8Q7Z7M8 397 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 KIF18BQ86Y91 864 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 PIP4K2CQ8TBX8 421 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 TOE1Q96GM8 510 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 KCNJ15Q99712 375 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 JAM3Q9BX67 310 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 KANSL2Q9H9L4 492 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 CABP5Q9NP86 173 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 DTLQ9NZJ0 730 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 NTMQ9P121 344 aa4.75□□□□□ -1.65
ECHDC1-213ENST00000474240 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 PPP1R12AO14974 1030 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 CYP7B1O75881 506 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 POU3F2P20265 443 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 PMLP29590 882 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 SARSP49591 514 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 SCLYQ96I15 445 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 NOX5Q96PH1 765 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 ORAI3Q9BRQ5 295 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 PPARGC1AQ9UBK2 798 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 SRPK3Q9UPE1 567 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 TSC22D4Q9Y3Q8 395 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 CD2APQ9Y5K6 639 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 HS3ST3A1Q9Y663 406 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 ATP23Q9Y6H3 246 aa4.74□□□□□ -1.65
ECHDC1-213ENST00000474240 ZNF561-AS1K7EIQ3 104 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 CLASP2O75122 1294 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 HIP1RO75146 1068 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 RASGRP1O95267 797 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 SRGAP2CP0DJJ0 459 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 PYGMP11217 842 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 ARHGAP36Q6ZRI8 547 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 LIMS2Q7Z4I7 341 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 TMEM209Q96SK2 561 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 SSBP3Q9BWW4 388 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 BCAS3Q9H6U6 928 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 SAMD15Q9P1V8 674 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 SIT1Q9Y3P8 196 aa4.73□□□□□ -1.65
ECHDC1-213ENST00000474240 ZNF536O15090 1300 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 DNAJC8O75937 253 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 CKMP06732 381 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 PDE6AP16499 860 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 DNM2P50570 870 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 HERVK_113P62684 666 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 TUSC3Q13454 348 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 TM4SF20Q53R12 229 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 TMEM177Q53S58 311 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 DALRD3Q5D0E6 543 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 FGD2Q7Z6J4 655 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 LRRTM3Q86VH5 581 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 TTLL6Q8N841 843 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 C2orf69Q8N8R5 385 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 CHST14Q8NCH0 376 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 ADAMTS17Q8TE56 1095 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 WNK4Q96J92 1243 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 SCYL1Q96KG9 808 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 CLUHP3Q96NS8 147 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 BOCQ9BWV1 1114 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 SPATA6Q9NWH7 488 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 MAPRE3Q9UPY8 281 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 INVSQ9Y283 1065 aa4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 TNPO3Q9Y5L0 923 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-213ENST00000474240 SLC12A8A0AV02 714 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 SLC27A2O14975 620 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 NKRFO15226 690 aaKnown RBP eCLIP4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 AMHP03971 560 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 OCRLQ01968 901 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 TKFCQ3LXA3 575 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 CFAP100Q494V2 611 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 GLB1LQ6UWU2 654 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 OTOP1Q7RTM1 612 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 OVCH1Q7RTY7 1134 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 PALM2Q8IXS6 379 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 IGSF22Q8N9C0 903 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 SMARCC2Q8TAQ2 1214 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 RXFP1Q9HBX9 757 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 CBLCQ9ULV8 474 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 ZKSCAN5Q9Y2L8 839 aa4.71□□□□□ -1.66
ECHDC1-213ENST00000474240 SMARCA5O60264 1052 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 GAS7O60861 476 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms