RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MYLIPQ8WY64 445 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 NKX2-4Q9H2Z4 354 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 TBC1D22BQ9NU19 505 aa12.71□□□□□ -0.37
CKS1B-206ENST00000474215 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
CKS1B-206ENST00000474215 DOCK5Q9H7D0 1870 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 IGKV6D-21A0A0A0MT36 114 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 MBLAC1A4D2B0 266 aaPredicted RBP12.7□□□□□ -0.38
CKS1B-206ENST00000474215 RRN3P2A6NIE6 340 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
CKS1B-206ENST00000474215 INSRRP14616 1297 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 MYOGP15173 224 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 KCNJ6P48051 423 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 SLC26A2P50443 739 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 TCTN1Q2MV58 587 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 PRR16Q569H4 304 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 FAM26DQ5JW98 314 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 MARCH8Q5T0T0 291 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 ABHD15Q6UXT9 468 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 RPAINQ86UA6 219 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 HERC6Q8IVU3 1022 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 UIMC1Q96RL1 719 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 SCN5AQ14524 2016 aa12.7□□□□□ -0.38
CKS1B-206ENST00000474215 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 M0R2N6 131 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 BACH1O14867 736 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 EDIL3O43854 480 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 EFCAB14O75071 495 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 WDR5P61964 334 aaKnown RBP12.69□□□□□ -0.38
CKS1B-206ENST00000474215 IGBP1P78318 339 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 NPY5RQ15761 445 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 FAM160B1Q5W0V3 765 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 RUFY4Q6ZNE9 571 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 RSPH3Q86UC2 560 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 SLC17A8Q8NDX2 589 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 LENG9Q96B70 501 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 TUBE1Q9UJT0 475 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
CKS1B-206ENST00000474215 STK36Q9NRP7 1315 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 CTDNEP1O95476 244 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 CHRNA1P02708 482 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 CTSHP09668 335 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 FOSL2P15408 326 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 XBP1P17861 261 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 KCNA4P22459 653 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 KRT76Q01546 638 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 ME3Q16798 604 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 ZNF746Q6NUN9 644 aaPredicted RBP12.68□□□□□ -0.38
CKS1B-206ENST00000474215 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 SEPT8Q92599 483 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 RIT2Q99578 217 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 PHF20Q9BVI0 1012 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 PRDM12Q9H4Q4 367 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 TCEAL9Q9UHQ7 104 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
CKS1B-206ENST00000474215 TRIP12Q14669 1992 aaPredicted RBP12.68□□□□□ -0.38
CKS1B-206ENST00000474215 CYP3A7-CYP3A51PA0A087WV96 503 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 MSH4O15457 936 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 TLL1O43897 1013 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 DTNBO60941 627 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 RPLP2P05387 115 aaKnown RBP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 CA3P07451 260 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 PSAPP07602 524 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 CYP3A7P24462 503 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 DEFB103AP81534 67 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 NONOQ15233 471 aaKnown RBP eCLIP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 Q4G0T1 1027 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 PPP2R2DQ66LE6 453 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 KRT25Q7Z3Z0 450 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 SMAP1Q8IYB5 467 aaPredicted RBP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 ATP8B4Q8TF62 1192 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 DNAJB3Q8WWF6 145 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 WASF1Q92558 559 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 ZBTB10Q96DT7 871 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 OSBPL7Q9BZF2 842 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 PCDHA10Q9Y5I2 948 aa12.67□□□□□ -0.38
CKS1B-206ENST00000474215 MAFBQ9Y5Q3 323 aaPredicted RBP12.67□□□□□ -0.38
CKS1B-206ENST00000474215 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 HBP1O60381 514 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms