RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LY6KQ17RY6 165 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 HYIQ5T013 277 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 IQSEC1Q6DN90 963 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 GPBP1Q86WP2 473 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 CATSPER3Q86XQ3 398 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 TRIML1Q8N9V2 468 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 CD99L2Q8TCZ2 262 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 SEPT1Q8WYJ6 367 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 GLG1Q92896 1179 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 FGD4Q96M96 766 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 SPATA33Q96N06 139 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 MMTAG2Q9BU76 263 aaKnown RBP11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 ZNF302Q9NR11 478 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 A0A087X0B3 334 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 GOLGA6L3A6NEY3 463 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 EML1O00423 815 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 DHX15O43143 795 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 RGS20O76081 388 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 FARP2O94887 1054 aaPredicted RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 EYA4O95677 639 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 SUPT20HL2P0C7V6 817 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 IDEP14735 1019 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 CNGA1P29973 690 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 FLT3LGP49771 235 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 PRMT2P55345 433 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 TNFAIP2Q03169 654 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 TYRO3Q06418 890 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 MCM6Q14566 821 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 CELF3Q5SZQ8 465 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 CCDC65Q8IXS2 484 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 GRAMD1CQ8IYS0 662 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 OR6J1Q8NGC5 347 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 ANP32BQ92688 251 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 STAMQ92783 540 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 FAM167AQ96KS9 214 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 GSDMAQ96QA5 445 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 AP5M1Q9H0R1 490 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 BLZF1Q9H2G9 400 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 BHMT2Q9H2M3 363 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 ZHX3Q9H4I2 956 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 SPC25Q9HBM1 224 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 RGL1Q9NZL6 768 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 GABBR1Q9UBS5 961 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 NRBP1Q9UHY1 535 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 DDX41Q9UJV9 622 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 ZNF215Q9UL58 517 aaPredicted RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 FAM184BQ9ULE4 1060 aa11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-202ENST00000474048 BECN2A8MW95 431 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 E9PMD0 336 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 BIN1O00499 593 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 KIF20AO95235 890 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 RPN1P04843 607 aaKnown RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 ADCYAP1R1P41586 468 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 PRKCZQ05513 592 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 GSE1Q14687 1217 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 L1TD1Q5T7N2 865 aaKnown RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 UTP14CQ5TAP6 766 aaKnown RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 SWSAP1Q6NVH7 229 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 CNNM4Q6P4Q7 775 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 RBM43Q6ZSC3 357 aaKnown RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 TRMT1LQ7Z2T5 733 aaKnown RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 NRBP2Q9NSY0 501 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 KBTBD4Q9NVX7 518 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 KCND2Q9NZV8 630 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 SEPT9Q9UHD8 586 aaPredicted RBP11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 PCDHA5Q9Y5H7 936 aa11.44□□□□□ -0.58
PRPF38A-202ENST00000474048 GOLGA6L19H0YKK7 550 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 SLITRK3O94933 977 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 FAM13AO94988 1023 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 CCNE2O96020 404 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 SPATA31C1P0DKV0 1188 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 AKR1A1P14550 325 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 YWHABP31946 246 aaKnown RBP11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 CYP2C19P33261 490 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 PPP1R2P41236 205 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 CPT1AP50416 773 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 SLC26A2P50443 739 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 NLRP12P59046 1061 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 PRKCEQ02156 737 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 DUSP28Q4G0W2 176 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 XKR9Q5GH70 373 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 STXBP4Q6ZWJ1 553 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 DYMQ7RTS9 669 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 USP6NLQ92738 828 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 HSD17B14Q9BPX1 270 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 TRIM9Q9C026 710 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 ARHGAP39Q9C0H5 1083 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms