RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883	CYLC2	Q14093	348 aa	Predicted RBP	13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CDON	Q4KMG0	1287 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CCDC102B	Q68D86	513 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	RFPL4B	Q6ZWI9	263 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	FAM133A	Q8N9E0	248 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	ATL1	Q8WXF7	558 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	EFHD2	Q96C19	240 aa	Predicted RBP	13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	GDAP1L1	Q96MZ0	367 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CIB1	Q99828	191 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	HEPH	Q9BQS7	1158 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	NUF2	Q9BZD4	464 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	SNX25	Q9H3E2	840 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CNGB3	Q9NQW8	809 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	INTU	Q9ULD6	942 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CTAGE15	A4D2H0	777 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	GOLGA8IP	A6NC78	632 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	LRRC72	A6NJI9	287 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	RASA4	O43374	803 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	ZBED1	O96006	694 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CTAGE8	P0CG41	777 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	COL6A1	P12109	1028 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	PPP2R1A	P30153	589 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	LIFR	P42702	1097 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	NLRP6	P59044	892 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	STK11	Q15831	433 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	DSTYK	Q6XUX3	929 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	DBX2	Q6ZNG2	339 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	INTS8	Q75QN2	995 aa	Known RBP	13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	DHX32	Q7L7V1	743 aa	Known RBP	13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CTAGE6	Q86UF2	777 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	CTAGE4	Q8IX94	777 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	FNDC8	Q8TC99	324 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	HERVK_113	Q902F9	699 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	FANCF	Q9NPI8	374 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	TACC3	Q9Y6A5	838 aa		13.72	□□□□□ -0.21
HCLS1-205	ENST00000473883	IKBKB	O14920	756 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	SPATA31D3	P0C874	917 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	SPATA1	Q5VX52	437 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	SPATA31D4	Q6ZUB0	917 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	MLKL	Q8NB16	471 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	OSBP2	Q969R2	916 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	ZSWIM4	Q9H7M6	989 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883		A0A088AWK7	358 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	RNF113A	O15541	343 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	ACSL4	O60488	711 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	F13A1	P00488	732 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	LMNA	P02545	664 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	FGA	P02671	866 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	HSD17B4	P51659	736 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	BPIFB3	P59826	476 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	CACNA2D3	Q8IZS8	1091 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	SH3KBP1	Q96B97	665 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	SMARCAD1	Q9H4L7	1026 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	VTA1	Q9NP79	307 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	LARS	Q9P2J5	1176 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	HDAC9	Q9UKV0	1011 aa		13.71	□□□□□ -0.21
HCLS1-205	ENST00000473883	TMEM114	B3SHH9	223 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	GNPAT	O15228	680 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	ARHGAP6	O43182	974 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	COL6A2	P12110	1019 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	NR2C2	P49116	596 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	HSD17B7	P56937	341 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	PPP2R2A	P63151	447 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	SNRNP48	Q6IEG0	339 aa	Known RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883		Q6ZNX1	250 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	HACE1	Q8IYU2	909 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CYP4X1	Q8N118	509 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CCDC89	Q8N998	374 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CCDC148	Q8NFR7	591 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	EHMT1	Q9H9B1	1298 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	SCPEP1	Q9HB40	452 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CASS4	Q9NQ75	786 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	THAP1	Q9NVV9	213 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	PCDHB6	Q9Y5E3	794 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	PCDHB4	Q9Y5E5	795 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	ARHGEF12	Q9NZN5	1544 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CCDC141	Q6ZP82	1450 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	BCL9	O00512	1426 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	TRIM64	A6NGJ6	449 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	TRIM64B	A6NI03	449 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	HIP1	O00291	1037 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	PDE5A	O76074	875 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	MYL6B	P14649	208 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	MDH1	P40925	334 aa	Known RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CEBPA	P49715	358 aa	Predicted RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	SNX16	P57768	344 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	SIM2	Q14190	667 aa	Predicted RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	SH3BP5L	Q7L8J4	393 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	ARHGEF2	Q92974	986 aa	Known RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	SEC16B	Q96JE7	1060 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CD93	Q9NPY3	652 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	STAG3	Q9UJ98	1225 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	LEMD3	Q9Y2U8	911 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	TRIM17	Q9Y577	477 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	NRXN1	Q9ULB1	1477 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	MAGEA13P	A6NCF6	341 aa		13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	RNGTT	O60942	597 aa	Known RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	CFL1	P23528	166 aa	Known RBP	13.7	□□□□□ -0.22
HCLS1-205	ENST00000473883	EVI2B	P34910	448 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 68 ms