RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 BBOX1O75936 387 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 KRT14P02533 472 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 SLC9A1P19634 815 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 MRPL12P52815 198 aaKnown RBP12.04□□□□□ -0.48
C9orf3-214ENST00000473778 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 ADAM9Q13443 819 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 PTPROQ16827 1216 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 C8orf74Q6P047 294 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 CATSPER3Q86XQ3 398 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 RNF10Q8N5U6 811 aaKnown RBP12.04□□□□□ -0.48
C9orf3-214ENST00000473778 SYN2Q92777 582 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-214ENST00000473778 LENG9Q96B70 501 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 CEP63Q96MT8 703 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-214ENST00000473778 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 PCDHGC5Q9Y5F6 944 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 MARCH6O60337 910 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 EPHB4P54760 987 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 PTK2Q05397 1052 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 KCNA1Q09470 495 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 MEI1Q5TIA1 1274 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 SIAH1Q8IUQ4 282 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
C9orf3-214ENST00000473778 ANO3Q9BYT9 981 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 ZHX3Q9H4I2 956 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 AIPL1Q9NZN9 384 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 NFU1Q9UMS0 254 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 RSPH10B2B2RC85 870 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 PPFIA4O75335 1185 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 RSPH10BP0C881 870 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 SPATA31C1P0DKV0 1188 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 NR2F2P24468 414 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 IRAK1P51617 712 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 SEPT2Q15019 361 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 DNAJC21Q5F1R6 531 aaKnown RBP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 GPATCH4Q5T3I0 446 aaKnown RBP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 ZNF571Q7Z3V5 609 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 IRF2BP2Q7Z5L9 587 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 SH2D3CQ8N5H7 860 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 FAM76AQ8TAV0 307 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 PIK3R5Q8WYR1 880 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 LRRC27Q9C0I9 530 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 NT5C3AQ9H0P0 336 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 DHX36Q9H2U1 1008 aaKnown RBP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 GDF3Q9NR23 364 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 USP21Q9UK80 565 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 KIF13BQ9NQT8 1826 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 KDM3AQ9Y4C1 1321 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 FAM86B1E9PN63 330 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 FAM86B2P0C5J1 330 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 TNFRSF8P28908 595 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 PAFAH1B1P43034 410 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
C9orf3-214ENST00000473778 GIT2Q14161 759 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 CFAP221Q4G0U5 840 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 CCDC70Q6NSX1 233 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 CAVIN3Q969G5 261 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 MBOAT7Q96N66 472 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 REEP2Q9BRK0 252 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 EPB41L5Q9HCM4 733 aa12.03□□□□□ -0.48
C9orf3-214ENST00000473778 CYP3A7-CYP3A51PA0A087WV96 503 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-214ENST00000473778 HEXIM1O94992 359 aaKnown RBP12.02□□□□□ -0.49
C9orf3-214ENST00000473778 MYBP10242 640 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
C9orf3-214ENST00000473778 CYP3A7P24462 503 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 GUCY2DQ02846 1103 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 TCP10Q12799 353 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-214ENST00000473778 EMBQ6PCB8 327 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 SFR1Q86XK3 245 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 GOLGA6L1Q8N7Z2 621 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-214ENST00000473778 KRT12Q99456 494 aa12.02□□□□□ -0.49
C9orf3-214ENST00000473778 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-214ENST00000473778 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-214ENST00000473778 AKAP3O75969 853 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 ZBTB48P10074 688 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-214ENST00000473778 CASP4P49662 377 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 PRR16Q569H4 304 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 KCTD16Q68DU8 428 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 CASKIN2Q8WXE0 1202 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms