RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 MBLAC1A4D2B0 266 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-209ENST00000473421 IFIT3O14879 490 aaKnown RBP14.56□□□□□ -0.08
TRAF4-209ENST00000473421 NT5C2P49902 561 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 TMEM62Q0P6H9 643 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 GRIK4Q16099 956 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 GNPTABQ3T906 1256 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 PAN2Q504Q3 1202 aaKnown RBP14.56□□□□□ -0.08
TRAF4-209ENST00000473421 PCNX4Q63HM2 1172 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 RBM23Q86U06 439 aaKnown RBP14.56□□□□□ -0.08
TRAF4-209ENST00000473421 TRAPPC12Q8WVT3 735 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 EDAQ92838 391 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 LMAN2LQ9H0V9 348 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-209ENST00000473421 BARX2Q9UMQ3 279 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-209ENST00000473421 FAM50BQ9Y247 325 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 PLXNA4Q9HCM2 1894 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 IGBP1P78318 339 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 PPFIA1Q13136 1202 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 CMTR1Q8N1G2 835 aaKnown RBP14.55□□□□□ -0.08
TRAF4-209ENST00000473421 KLHL23Q8NBE8 558 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 VN1R2Q8NFZ6 395 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 IGDCC4Q8TDY8 1250 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 SENP7Q9BQF6 1050 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 UPF3BQ9BZI7 483 aaKnown RBP14.55□□□□□ -0.08
TRAF4-209ENST00000473421 FAM49AQ9H0Q0 323 aaPredicted RBP14.55□□□□□ -0.08
TRAF4-209ENST00000473421 TMX1Q9H3N1 280 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 TUBE1Q9UJT0 475 aa14.55□□□□□ -0.08
TRAF4-209ENST00000473421 hCG_1642624A0A1W2PR95 340 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 LOC730098B7Z3J9 87 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 PER2O15055 1255 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 NCK2O43639 380 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 STAM2O75886 525 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 EYA4O95677 639 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
TRAF4-209ENST00000473421 PDE4AP27815 886 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 NRIP1P48552 1158 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 NDUFV1P49821 464 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 TCF15Q12870 199 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 TRIM67Q6ZTA4 783 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 KCNH6Q9H252 994 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 ZDBF2Q9HCK1 2354 aa14.54□□□□□ -0.08
TRAF4-209ENST00000473421 TMEM221A6NGB7 291 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 E7EWF7 191 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 M0R296 226 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 MGEA5O60502 916 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 INSRRP14616 1297 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-209ENST00000473421 MRPS6P82932 125 aaKnown RBP14.53□□□□□ -0.08
TRAF4-209ENST00000473421 WTAPQ15007 396 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 UBE2SQ16763 222 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 TMEM266Q2M3C6 531 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 TAF2Q6P1X5 1199 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 TSHZ1Q6ZSZ6 1077 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 SMRP1Q8NCR6 262 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 SMARCC2Q8TAQ2 1214 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 POF1BQ8WVV4 589 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 SEPT1Q8WYJ6 367 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 PBXIP1Q96AQ6 731 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 MFSD14AQ96MC6 490 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 CDHR5Q9HBB8 845 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 FAM86C1Q9NVL1 165 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 PADI3Q9ULW8 664 aa14.53□□□□□ -0.08
TRAF4-209ENST00000473421 USP15Q9Y4E8 981 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-209ENST00000473421 KMT2EQ8IZD2 1858 aa14.52□□□□□ -0.08
TRAF4-209ENST00000473421 PIK3CDO00329 1044 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 VCPP55072 806 aaKnown RBP14.52□□□□□ -0.09
TRAF4-209ENST00000473421 ZXDAP98168 799 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 RAB11FIP4Q86YS3 637 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 SRBD1Q8N5C6 995 aaKnown RBP14.52□□□□□ -0.09
TRAF4-209ENST00000473421 EFHBQ8N7U6 833 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 CYP2W1Q8TAV3 490 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 GLG1Q92896 1179 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 P2RX5Q93086 422 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 PLVAPQ9BX97 442 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 CDH22Q9UJ99 828 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 UBIAD1Q9Y5Z9 338 aa14.52□□□□□ -0.09
TRAF4-209ENST00000473421 HIP1O00291 1037 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 RXRAP19793 462 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 COASYQ13057 564 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 CBX2Q14781 532 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-209ENST00000473421 BMP8AQ7Z5Y6 402 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-209ENST00000473421 CMTR2Q8IYT2 770 aaKnown RBP14.51□□□□□ -0.09
TRAF4-209ENST00000473421 POP1Q99575 1024 aaKnown RBP14.51□□□□□ -0.09
TRAF4-209ENST00000473421 RWDD1Q9H446 243 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-209ENST00000473421 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 ERAP1Q9NZ08 941 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 RWDD3Q9Y3V2 267 aa14.51□□□□□ -0.09
TRAF4-209ENST00000473421 PDGFBP01127 241 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-209ENST00000473421 ERVFC1P60507 584 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 FAM102BQ5T8I3 360 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 NLRX1Q86UT6 975 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 NPAS4Q8IUM7 802 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 ZNF654Q8IZM8 581 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 EXOC6Q8TAG9 804 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 GPRASP2Q96D09 838 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 ASIC4Q96FT7 647 aa14.5□□□□□ -0.09
TRAF4-209ENST00000473421 RPGRIP1Q96KN7 1286 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms