RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 MYH4Q9Y623 1939 aa22.42■■□□□ 1.18
FSCN1-205ENST00000473330 MED24O75448 989 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 ECHS1P30084 290 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 CASP5P51878 434 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 SLC12A3P55017 1021 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 B4GALNT4Q76KP1 1039 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 SCFD2Q8WU76 684 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 EPN3Q9H201 632 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 CCNL1Q9UK58 526 aaPredicted RBP22.41■■□□□ 1.18
FSCN1-205ENST00000473330 PLAAQ9Y263 795 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 INPP5BP32019 993 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 STAT3P40763 770 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 USP11P51784 963 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 DNAAF5Q86Y56 855 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 ZHX3Q9H4I2 956 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 KCNMB3Q9NPA1 279 aa22.41■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L15C9J2P7 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L13C9JLJ4 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L11C9JVI0 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L18D6R9N7 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L22D6RA61 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L17D6RBQ6 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L19D6RCP7 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L20D6RJB6 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 KRT18P05783 430 aaKnown RBP22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L24Q0WX57 530 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 USP17L6PQ6QN14 398 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 KCTD1Q719H9 257 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 LRRC57Q8N9N7 239 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 PLCB1Q9NQ66 1216 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 SWAP70Q9UH65 585 aa22.4■■□□□ 1.18
FSCN1-205ENST00000473330 ZBTB48P10074 688 aaPredicted RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 UCHL3P15374 230 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 RFC4P35249 363 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 ITGB3BPQ13352 177 aaPredicted RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 MMS22LQ6ZRQ5 1243 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 ACTRT1Q8TDG2 376 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 TBC1D22AQ8WUA7 517 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 PBKQ96KB5 322 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 NAP1L4Q99733 375 aaKnown RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 DHX36Q9H2U1 1008 aaKnown RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 DDX4Q9NQI0 724 aaKnown RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 NAGPAQ9UK23 515 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 ATXN2Q99700 1313 aaKnown RBP22.39■■□□□ 1.18
FSCN1-205ENST00000473330 PITPNM2Q9BZ72 1349 aa22.39■■□□□ 1.18
FSCN1-205ENST00000473330 HMGB1P1B2RPK0 211 aaPredicted RBP22.39■■□□□ 1.17
FSCN1-205ENST00000473330 PPP1R37O75864 691 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 CEP85LQ5SZL2 805 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 MAATS1Q7Z4T9 603 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 FRMD5Q7Z6J6 570 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 EIF1ADQ8N9N8 165 aaKnown RBP22.39■■□□□ 1.17
FSCN1-205ENST00000473330 RBM46Q8TBY0 533 aaKnown RBP22.39■■□□□ 1.17
FSCN1-205ENST00000473330 SPAG5Q96R06 1193 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 TMBIM4Q9HC24 238 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 TRAF3IP3Q9Y228 551 aa22.39■■□□□ 1.17
FSCN1-205ENST00000473330 POTEFA5A3E0 1075 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 CEP104O60308 925 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 POTEIP0CG38 1075 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 PON1P27169 355 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 MDH1P40925 334 aaKnown RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 PTGISQ16647 500 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 GPATCH4Q5T3I0 446 aaKnown RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 NAA35Q5VZE5 725 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 POTEGQ6S5H5 508 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 POTEEQ6S8J3 1075 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 SUGP1Q8IWZ8 645 aaKnown RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 POLLQ9UGP5 575 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 BZW2Q9Y6E2 419 aaKnown RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 BHMG1C9JSJ3 638 aaPredicted RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 SLC26A4O43511 780 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 AFPP02771 609 aaKnown RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 HOXD13P35453 343 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 HLTFQ14527 1009 aaKnown RBP eCLIP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 PTPROQ16827 1216 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 PRR5LQ6MZQ0 368 aa22.38■■□□□ 1.17
FSCN1-205ENST00000473330 ARMCX3Q9UH62 379 aaPredicted RBP22.38■■□□□ 1.17
FSCN1-205ENST00000473330 KIF13BQ9NQT8 1826 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 HSD17B3P37058 310 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 GIT2Q14161 759 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 ALKBH5Q6P6C2 394 aaKnown RBP22.37■■□□□ 1.17
FSCN1-205ENST00000473330 LRIG3Q6UXM1 1119 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 IPO4Q8TEX9 1081 aaKnown RBP22.37■■□□□ 1.17
FSCN1-205ENST00000473330 PAGR1Q9BTK6 254 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 NENFQ9UMX5 172 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 BTAF1O14981 1849 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 H0YGN5 161 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 SHMT1P34896 483 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 PRKCIP41743 596 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 GTF2A1P52655 376 aaPredicted RBP22.37■■□□□ 1.17
FSCN1-205ENST00000473330 PSMC6P62333 389 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 CUL1Q13616 776 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 UAP1Q16222 522 aaPredicted RBP22.37■■□□□ 1.17
FSCN1-205ENST00000473330 EXOC3L4Q17RC7 722 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 KNOP1Q1ED39 458 aaKnown RBP22.37■■□□□ 1.17
FSCN1-205ENST00000473330 FBXW10Q5XX13 1052 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 DDX42Q86XP3 938 aaKnown RBP eCLIP22.37■■□□□ 1.17
FSCN1-205ENST00000473330 CATSPER3Q86XQ3 398 aa22.37■■□□□ 1.17
FSCN1-205ENST00000473330 SPATS2Q86XZ4 545 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms