RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 LGALS2P05162 132 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 CYP3A7P24462 503 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 MCM7P33993 719 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 PSEN2P49810 448 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 TLE2Q04725 743 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 NBR1Q14596 966 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 MFSD10Q14728 455 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 ZNF174Q15697 407 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 KIAA0753Q2KHM9 967 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 ADALQ6DHV7 355 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 TRIM50Q86XT4 487 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 C7orf31Q8N865 590 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 KATNAL1Q9BW62 490 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 PRKAG2Q9UGJ0 569 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 CLIC4Q9Y696 253 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 GSTTP1A0A1W2PQM5 241 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 H3BRB1 525 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 TLR3O15455 904 aaKnown RBP11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 TRAK2O60296 914 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 CUTAO60888 179 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 CCNE2O96020 404 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 MARK3P27448 753 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 TOB1P50616 345 aaPredicted RBP11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 KRT76Q01546 638 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 CALCRLQ16602 461 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 KLHL40Q2TBA0 621 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 ARL6IP4Q66PJ3 421 aaKnown RBP11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 KAT2BQ92831 832 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 SLC5A5Q92911 643 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 RIT2Q99578 217 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
SMARCD3-208ENST00000472789 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 A0A1W2PQD8 194 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 WNT7AO00755 349 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 DHX15O43143 795 aaKnown RBP11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 NEMFO60524 1076 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 F2P00734 622 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 PSAPP07602 524 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 SYN1P17600 705 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 SNX17Q15036 470 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 FAM160B1Q5W0V3 765 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 ZNF746Q6NUN9 644 aaPredicted RBP11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 CCDC73Q6ZRK6 1079 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 TRMT1LQ7Z2T5 733 aaKnown RBP11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 MIER3Q7Z3K6 550 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 ETNPPLQ8TBG4 499 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 CCDC34Q96HJ3 373 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 MBOAT7Q96N66 472 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 C16orf70Q9BSU1 422 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 TMEM39AQ9NV64 488 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 PCDHB6Q9Y5E3 794 aa11.87□□□□□ -0.51
SMARCD3-208ENST00000472789 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 WDR64B1ANS9 1081 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 CLTBP09497 229 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 SUPT20HL2P0C7V6 817 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PRPHP41219 470 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 TXKP42681 527 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 STAT5BP51692 787 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 JAK3P52333 1124 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PTGDRQ13258 359 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PTPAQ15257 358 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 C1orf53Q5VUE5 145 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 SWSAP1Q6NVH7 229 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 NFRKBQ6P4R8 1299 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 ZNF579Q8NAF0 562 aaKnown RBP11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 GDF15Q99988 308 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PYM1Q9BRP8 204 aaKnown RBP11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 RAB34Q9BZG1 259 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 TRPV6Q9H1D0 765 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 UNC45AQ9H3U1 944 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 ZNF302Q9NR11 478 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 DISC1Q9NRI5 854 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 TRMT13Q9NUP7 481 aaKnown RBP11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 HDAC6Q9UBN7 1215 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 TRPC6Q9Y210 931 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 PCDHA10Q9Y5I2 948 aa11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
SMARCD3-208ENST00000472789 CDH23Q9H251 3354 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 C17orf102A2RUQ5 167 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms