RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 MINDY4BA8MYZ0 360 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 F8W031 263 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 ZNF865P0CJ78 1059 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 HOXD10P28358 340 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 HIBADHP31937 336 aaKnown RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 GBP2P32456 591 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 ZEB1P37275 1124 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 CASP7P55210 303 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 HNRNPUQ00839 825 aaKnown RBP eCLIP4.36□□□□□ -1.71
XRN1-209ENST00000472625 PRKCQQ04759 706 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 CRHR2Q13324 411 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 FZD5Q13467 585 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 SNAPC2Q13487 334 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 PRKG1Q13976 671 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 CCL15Q16663 113 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 ZNF648Q5T619 568 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 DLK2Q6UY11 383 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 MOB2Q70IA6 237 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 FAM83AQ86UY5 434 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 MCATQ8IVS2 390 aaKnown RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 GOLM1Q8NBJ4 401 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 ZNF507Q8TCN5 953 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 TSR2Q969E8 191 aaKnown RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 OPTNQ96CV9 577 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 VWCEQ96DN2 955 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 MISP3Q96FF7 219 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 EAF1Q96JC9 268 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 ZNF333Q96JL9 665 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 TMEM87BQ96K49 555 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 HRASLS5Q96KN8 279 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 Q96M66 194 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 PARK7Q99497 189 aaKnown RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 DPH2Q9BQC3 489 aaPredicted RBP4.36□□□□□ -1.71
XRN1-209ENST00000472625 HTATIP2Q9BUP3 242 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 MRIQ9BWK5 157 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 FOXQ1Q9C009 403 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 MRS2Q9HD23 443 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 ADAM30Q9UKF2 790 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 PTPRCP08575 1304 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 SSC5DA1L4H1 1573 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 TAF1P21675 1872 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 MYH3P11055 1940 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 A0A1W2PPC1 479 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 CLRN2A0PK11 232 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 TLR2O60603 784 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 C8AP07357 584 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 IFIT1P09914 478 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 JUNBP17275 347 aaPredicted RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 EIF4A3P38919 411 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 UBXN2AP68543 259 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 PPATQ06203 517 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 PPIL2Q13356 520 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 VGLL4Q14135 290 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 MPP2Q14168 576 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 PUM3Q15397 648 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 SLC4A8Q2Y0W8 1093 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 HABP4Q5JVS0 413 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 BEND3Q5T5X7 828 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 PRAMEF18Q5VWM3 479 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 LMBR1LQ6UX01 489 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 REC114Q7Z4M0 266 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 ERO1BQ86YB8 467 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 HID1Q8IV36 788 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 ZGPATQ8N5A5 531 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.35□□□□□ -1.71
XRN1-209ENST00000472625 PI4K2BQ8TCG2 481 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 CD99L2Q8TCZ2 262 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 WRNIP1Q96S55 665 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 MXD3Q9BW11 206 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 ZNF341Q9BYN7 854 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 SEMA3GQ9NS98 782 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 GNL3LQ9NVN8 582 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 VAV3Q9UKW4 847 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 ST14Q9Y5Y6 855 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 ARID1BQ8NFD5 2236 aaPredicted RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 COL4A1P02462 1669 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 LAMB1P07942 1786 aa4.35□□□□□ -1.71
XRN1-209ENST00000472625 RBBP6Q7Z6E9 1792 aaKnown RBP4.35□□□□□ -1.71
XRN1-209ENST00000472625 RANBP2P49792 3224 aaKnown RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 LAMA3Q16787 3333 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 CHURC1-FNTBB4DL54 471 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ANP32CO43423 234 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 TAF5LO75529 589 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 USP2O75604 605 aaPredicted RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 ATE1O95260 518 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 PGRP06401 933 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 KLRK1P26718 216 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ETF1P62495 437 aaKnown RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 LACTBP83111 547 aaPredicted RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 IKZF1Q13422 519 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ZNF124Q15973 351 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ZNF394Q53GI3 561 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 METTL24Q5JXM2 366 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 NBPF12Q5TAG4 269 aaPredicted RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 SLC6A19Q695T7 634 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 LETMD1Q6P1Q0 360 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 HHIPL2Q6UWX4 724 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 CERS5Q8N5B7 392 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms