RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ITIH3Q06033 890 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 RESTQ13127 1097 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 KATNAL1Q9BW62 490 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 SPZ1Q9BXG8 430 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
IRF1-208ENST00000472045 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 VWDEQ8N2E2 1590 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 CD58P19256 250 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 RNF187Q5TA31 235 aaPredicted RBP13.35□□□□□ -0.27
IRF1-208ENST00000472045 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.35□□□□□ -0.27
IRF1-208ENST00000472045 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
IRF1-208ENST00000472045 PFASO15067 1338 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 CRCPO75575 148 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 CDC27P30260 824 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 USP11P51784 963 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 MAN2A1Q16706 1144 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
IRF1-208ENST00000472045 FHDC1Q9C0D6 1143 aaPredicted RBP13.35□□□□□ -0.27
IRF1-208ENST00000472045 RARBP10826 455 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 XPAP23025 273 aaPredicted RBP13.34□□□□□ -0.27
IRF1-208ENST00000472045 SKIV2LQ15477 1246 aaKnown RBP13.34□□□□□ -0.27
IRF1-208ENST00000472045 GEN1Q17RS7 908 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 CCT6BQ92526 530 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 FEZ2Q9UHY8 353 aaPredicted RBP13.34□□□□□ -0.27
IRF1-208ENST00000472045 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 GGPS1O95749 300 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 GH1P01241 217 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 TUBBP07437 444 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 KCNJ6P48051 423 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
IRF1-208ENST00000472045 TUBB2AQ13885 445 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 CEP55Q53EZ4 464 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 MAP7D3Q8IWC1 876 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 TUBB2BQ9BVA1 445 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 RASA1P20936 1047 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 POTEDQ86YR6 584 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 OR6B3Q8NGW1 331 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 KCNK9Q9NPC2 374 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 SEPT10Q9P0V9 454 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 STAT5BP51692 787 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 HS1BP3Q53T59 392 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 KLHL7Q8IXQ5 586 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 CHST13Q8NET6 341 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 RNF139Q8WU17 664 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 HEXIM2Q96MH2 286 aaKnown RBP13.34□□□□□ -0.27
IRF1-208ENST00000472045 LXNQ9BS40 222 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 KIF9Q9HAQ2 790 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 PPP2R3BQ9Y5P8 575 aa13.34□□□□□ -0.27
IRF1-208ENST00000472045 BZW2Q9Y6E2 419 aaKnown RBP13.34□□□□□ -0.27
IRF1-208ENST00000472045 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.27
IRF1-208ENST00000472045 IFNB1P01574 187 aa13.33□□□□□ -0.27
IRF1-208ENST00000472045 LONRF2Q1L5Z9 754 aa13.33□□□□□ -0.27
IRF1-208ENST00000472045 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.27
IRF1-208ENST00000472045 OXER1Q8TDS5 423 aa13.33□□□□□ -0.27
IRF1-208ENST00000472045 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.27
IRF1-208ENST00000472045 PAGE5Q96GU1 130 aa13.33□□□□□ -0.27
IRF1-208ENST00000472045 POLR3FQ9H1D9 316 aaPredicted RBP13.33□□□□□ -0.27
IRF1-208ENST00000472045 SH3BP5O60239 455 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 LRRN2O75325 713 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 CCNE1P24864 410 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 ZNF667Q5HYK9 610 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.33□□□□□ -0.28
IRF1-208ENST00000472045 GDAQ9Y2T3 454 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 V9GYY5 206 aaPredicted RBP13.33□□□□□ -0.28
IRF1-208ENST00000472045 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.28
IRF1-208ENST00000472045 SARNPP82979 210 aaKnown RBP13.33□□□□□ -0.28
IRF1-208ENST00000472045 CFAP221Q4G0U5 840 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 CFAP157Q5JU67 520 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 ZDHHC15Q96MV8 337 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 KIAA1586Q9HCI6 787 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 GCNT4Q9P109 453 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 RICTORQ6R327 1708 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 SLC16A4O15374 487 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 CEP57Q86XR8 500 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 ZNF668Q96K58 619 aaPredicted RBP13.33□□□□□ -0.28
IRF1-208ENST00000472045 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 MAN1B1Q9UKM7 699 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 ZNF609O15014 1411 aa13.33□□□□□ -0.28
IRF1-208ENST00000472045 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 POTECB2RU33 542 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 E9PMD0 336 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 ALDH3A1P30838 453 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 MAP1SQ66K74 1059 aaPredicted RBP13.32□□□□□ -0.28
IRF1-208ENST00000472045 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms