RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 EDIL3O43854 480 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 TLL1O43897 1013 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 CTSHP09668 335 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 TAF2Q6P1X5 1199 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 RUFY4Q6ZNE9 571 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 GLG1Q92896 1179 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 SLC26A6Q9BXS9 759 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 MYH9P35579 1960 aaKnown RBP13.12□□□□□ -0.31
COL4A3-205ENST00000471862 LOXHD1Q8IVV2 1947 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 CCNE2O96020 404 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 CHRNA1P02708 482 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 INSRRP14616 1297 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 GNA11P29992 359 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 CIITAP33076 1130 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 ZNF76P36508 570 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
COL4A3-205ENST00000471862 PLCB4Q15147 1175 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 ABHD15Q6UXT9 468 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 PLPPR4Q7Z2D5 763 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 CCDC148Q8NFR7 591 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 RASGRP4Q8TDF6 673 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 SEPT8Q92599 483 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 RAD9AQ99638 391 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
COL4A3-205ENST00000471862 PRDM6Q9NQX0 595 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 REV3LO60673 3130 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 COL4A6Q14031 1691 aa13.12□□□□□ -0.31
COL4A3-205ENST00000471862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
COL4A3-205ENST00000471862 RRN3P2A6NIE6 340 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 RFXAPO00287 272 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 IGFBP4P22692 258 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 STAT5BP51692 787 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 HTRA4P83105 476 aaPredicted RBP13.11□□□□□ -0.31
COL4A3-205ENST00000471862 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
COL4A3-205ENST00000471862 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 LENG9Q96B70 501 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 AZI2Q9H6S1 392 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 CERS4Q9HA82 394 aa13.11□□□□□ -0.31
COL4A3-205ENST00000471862 EVPLQ92817 2033 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
COL4A3-205ENST00000471862 SLC26A2P50443 739 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 NPY5RQ15761 445 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-205ENST00000471862 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-205ENST00000471862 DNAJB3Q8WWF6 145 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 ARNTL2Q8WYA1 636 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 APBB2Q92870 758 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 ZBTB10Q96DT7 871 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
COL4A3-205ENST00000471862 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
COL4A3-205ENST00000471862 PDRG1Q9NUG6 133 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 MTCH2Q9Y6C9 303 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 TTC3P53804 2025 aa13.1□□□□□ -0.31
COL4A3-205ENST00000471862 M0R2N6 131 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
COL4A3-205ENST00000471862 LPXNO60711 386 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 DEXIO95424 95 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 AMHP03971 560 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
COL4A3-205ENST00000471862 GHRP10912 638 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 ATP4AP20648 1035 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 ANAPC15P60006 121 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 ERVK-21P61565 698 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 IGBP1P78318 339 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 SSRP1Q08945 709 aaKnown RBP13.09□□□□□ -0.31
COL4A3-205ENST00000471862 LPIN1Q14693 890 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 FBXO47Q5MNV8 452 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
COL4A3-205ENST00000471862 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 TRIM22Q8IYM9 498 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
COL4A3-205ENST00000471862 TRAPPC12Q8WVT3 735 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 TNPO1Q92973 898 aaKnown RBP13.09□□□□□ -0.31
COL4A3-205ENST00000471862 TOP1MTQ969P6 601 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 PCDHA2Q9Y5H9 948 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms