RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 DSCC1Q9BVC3 393 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 RSPH9Q9H1X1 276 aaPredicted RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 JPH1Q9HDC5 661 aaPredicted RBP7.31□□□□□ -1.24
NF1-208ENST00000471572 BLOC1S4Q9NUP1 217 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 FBXL7Q9UJT9 491 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 TPCN1Q9ULQ1 816 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 CORO2BQ9UQ03 480 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 RPGRIP1LQ68CZ1 1315 aa7.31□□□□□ -1.24
NF1-208ENST00000471572 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 KCNK3O14649 394 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 AURKAO14965 403 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 CD3EP07766 207 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 VEGFAP15692 232 aaPredicted RBP7.3□□□□□ -1.24
NF1-208ENST00000471572 PDE6AP16499 860 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 HTR1BP28222 390 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 ANO4Q32M45 955 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 PGS1Q32NB8 556 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 KRT77Q7Z794 578 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 CDH24Q86UP0 819 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.3□□□□□ -1.24
NF1-208ENST00000471572 SIRT2Q8IXJ6 389 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 VWA5B2Q8N398 1253 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 KLHL23Q8NBE8 558 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 KCT2Q8NC54 265 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 NELL2Q99435 816 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 ASPNQ9BXN1 380 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 VPS45Q9NRW7 570 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 RASSF1Q9NS23 344 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 CLEC1BQ9P126 229 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 AP4E1Q9UPM8 1137 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 BACE2Q9Y5Z0 518 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 C2orf71A6NGG8 1288 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 RRN3P2A6NIE6 340 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 IFIT1P09914 478 aaKnown RBP7.3□□□□□ -1.24
NF1-208ENST00000471572 BMP4P12644 408 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 LACTBP83111 547 aaPredicted RBP7.3□□□□□ -1.24
NF1-208ENST00000471572 IRF9Q00978 393 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 NUCB1Q02818 461 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 FAM209BQ5JX69 171 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 MBLAC2Q68D91 279 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 CRTC3Q6UUV7 619 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 KCNK18Q7Z418 384 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 PPM1NQ8N819 430 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.3□□□□□ -1.24
NF1-208ENST00000471572 RNF141Q8WVD5 230 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 COA7Q96BR5 231 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
NF1-208ENST00000471572 QRSL1Q9H0R6 528 aaKnown RBP7.3□□□□□ -1.24
NF1-208ENST00000471572 PRR13Q9NZ81 148 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 CRYL1Q9Y2S2 319 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 ZNF281Q9Y2X9 895 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 PCDHGB2Q9Y5G2 931 aa7.3□□□□□ -1.24
NF1-208ENST00000471572 LRIG2O94898 1065 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 PRAMEF1O95521 474 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 ENPP1P22413 925 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 CACNB3P54284 484 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 JAM2P57087 298 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 ANO6Q4KMQ2 910 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 HP1BP3Q5SSJ5 553 aaPredicted RBP7.29□□□□□ -1.24
NF1-208ENST00000471572 IZUMO3Q5VZ72 239 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 C20orf204Q6ZNR8 217 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 PDZD4Q76G19 769 aaPredicted RBP7.29□□□□□ -1.24
NF1-208ENST00000471572 CXorf38Q8TB03 319 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 LRTOMTQ8WZ04 291 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 NUP62CLQ9H1M0 184 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 KIAA1586Q9HCI6 787 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 ITM2CQ9NQX7 267 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 RNF112Q9ULX5 631 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 NOL7Q9UMY1 257 aaKnown RBP7.29□□□□□ -1.24
NF1-208ENST00000471572 EDARQ9UNE0 448 aa7.29□□□□□ -1.24
NF1-208ENST00000471572 GRK3P35626 688 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 INF2Q27J81 1249 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 ANGEL2Q5VTE6 544 aaKnown RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 E4F1Q66K89 784 aaPredicted RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 RETSATQ6NUM9 610 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 LETMD1Q6P1Q0 360 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 OSTM1Q86WC4 334 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 MFSD2AQ8NA29 543 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 UBASH3BQ8TF42 649 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 FCRL3Q96P31 734 aaPredicted RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 ATXN3LQ9H3M9 355 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 RIC8AQ9NPQ8 531 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 CATSPERZQ9NTU4 200 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 CTDP1Q9Y5B0 961 aaPredicted RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 PCDHA2Q9Y5H9 948 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 MROH2BQ7Z745 1585 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 FAM155AB1AL88 458 aaPredicted RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 SIGLEC6O43699 453 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 AMY2AP04746 511 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 VDRP11473 427 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 AMY2BP19961 511 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 POU4F1Q01851 419 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 MOGSQ13724 837 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 FSCN1Q16658 493 aaKnown RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 EXOSC6Q5RKV6 272 aaKnown RBP7.28□□□□□ -1.24
NF1-208ENST00000471572 OR8H2Q8N162 312 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 SSH1Q8WYL5 1049 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 PHKBQ93100 1093 aa7.28□□□□□ -1.24
NF1-208ENST00000471572 TRIM63Q969Q1 353 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms