RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 NTRK3Q16288 839 aa11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 BRF1Q92994 677 aa11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 LARP6Q9BRS8 491 aaKnown RBP11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 BARHL2Q9NY43 387 aa11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 SIP14410 1827 aa11.19□□□□□ -0.62
RPRD1B-204ENST00000471511 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 IGKV6D-21A0A0A0MT36 114 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 SPDYE3A6NKU9 549 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 TNFRSF10AO00220 468 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 ENPP3O14638 875 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 ATG7O95352 703 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 ADCY7P51828 1080 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 ACTR2P61160 394 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 TMEM62Q0P6H9 643 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 SKIV2LQ15477 1246 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 CEP55Q53EZ4 464 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 RNF20Q5VTR2 975 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 RPAINQ86UA6 219 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 CRIPAKQ8N1N5 446 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 SEPT8Q92599 483 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 SYMPKQ92797 1274 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 PHKBQ93100 1093 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 TGS1Q96RS0 853 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 UHRF1Q96T88 793 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 AGXT2Q9BYV1 514 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 RC3H2Q9HBD1 1191 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 CD320Q9NPF0 282 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 SLC9A2Q9UBY0 812 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 MICAL3Q7RTP6 2002 aa11.18□□□□□ -0.62
RPRD1B-204ENST00000471511 NCOR1O75376 2440 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 CAND2O75155 1236 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 AMHP03971 560 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 RPS6KB1P23443 525 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 SREBF1P36956 1147 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 EPC2Q52LR7 807 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 ABHD15Q6UXT9 468 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 GIMAP8Q8ND71 665 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 GLG1Q92896 1179 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 FAM49AQ9H0Q0 323 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 SMARCAD1Q9H4L7 1026 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 NCOA5Q9HCD5 579 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 JPH1Q9HDC5 661 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 ZNF215Q9UL58 517 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 INSL6Q9Y581 213 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
RPRD1B-204ENST00000471511 NFASCO94856 1347 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 MAFGO15525 162 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 EFCAB14O75071 495 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 GNAT1P11488 350 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 SCG2P13521 617 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 CD52P31358 61 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 METAP2P50579 478 aaKnown RBP eCLIP11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 TOB2Q14106 344 aaPredicted RBP11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 CCDC60Q8IWA6 550 aaPredicted RBP11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 GJA10Q969M2 543 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 LENG9Q96B70 501 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 TMX1Q9H3N1 280 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 NAP1L2Q9ULW6 460 aaPredicted RBP11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 NID2Q14112 1375 aa11.16□□□□□ -0.62
RPRD1B-204ENST00000471511 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 FOSP01100 380 aaPredicted RBP11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 CYP3A4P08684 503 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 GATMP50440 423 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 STAT5BP51692 787 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 MRPS6P82932 125 aaKnown RBP11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 KRT32Q14532 448 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 MTHFD1LQ6UB35 978 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 PLPPR4Q7Z2D5 763 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 PLA2G4DQ86XP0 818 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 TMEM192Q8IY95 271 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 FBXL16Q8N461 479 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 TMEM40Q8WWA1 233 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 ZNF689Q96CS4 500 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms