RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	ANKRD7	Q92527	254 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	DHX38	Q92620	1227 aa	Known RBP	4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	KIF1BP	Q96EK5	621 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	DUSP9	Q99956	384 aa	Known RBP	4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	MRI	Q9BWK5	157 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	SLITRK6	Q9H5Y7	841 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	TSPYL4	Q9UJ04	414 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	EXOC6B	Q9Y2D4	811 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	SBF2	Q86WG5	1849 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	SPEF2	Q9C093	1822 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	CACNA1G	O43497	2377 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	LAMB4	A4D0S4	1761 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	COL15A1	P39059	1388 aa		4.27	□□□□□ -1.73
CSMD2-208	ENST00000471438	LTBP1	Q14766	1721 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	COL6A3	P12111	3177 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	TRIOBP	Q9H2D6	2365 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438		F6X3S4	739 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	HIP1	O00291	1037 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	GFRA2	O00451	464 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	ALDH1L1	O75891	902 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	GLRX3	O76003	335 aa	Known RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	ADCY5	O95622	1261 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	PGR	P06401	933 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	CTSH	P09668	335 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	TPP2	P29144	1249 aa	Predicted RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	LIG3	P49916	1009 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	AK2	P54819	239 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	FAM193A	P78312	1265 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	ADAM17	P78536	824 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	SEPT6	Q14141	434 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	UBXN11	Q5T124	520 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	ZFYVE27	Q5T4F4	411 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	BEND3	Q5T5X7	828 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	CDH24	Q86UP0	819 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	SPPL2C	Q8IUH8	684 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	RIN3	Q8TB24	985 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	PIWIL2	Q8TC59	973 aa	Known RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	RUFY2	Q8WXA3	655 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	JARID2	Q92833	1246 aa	Predicted RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	MAP4K1	Q92918	833 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	SYTL4	Q96C24	671 aa	Predicted RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	GTPBP4	Q9BZE4	634 aa	Known RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	IL25	Q9H293	177 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	MTMR6	Q9Y217	621 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	PCDHB5	Q9Y5E4	795 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	LRRFIP2	Q9Y608	721 aa	Known RBP	4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	RFX7	Q2KHR2	1363 aa		4.26	□□□□□ -1.73
CSMD2-208	ENST00000471438	AFDN	P55196	1824 aa	Known RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	WASH4P	A8MWX3	477 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	AP5Z1	O43299	807 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	BPNT1	O95861	308 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	UBTFL1	P0CB47	393 aa	Predicted RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	ZSCAN20	P17040	1043 aa	Predicted RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	PDC	P20941	246 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	HOXC9	P31274	260 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	EIF4A1	P60842	406 aa	Known RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	DAB2	P98082	770 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	EGR3	Q06889	387 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	DMTN	Q08495	405 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	PSMD2	Q13200	908 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	CRB2	Q5IJ48	1285 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	ADGRF1	Q5T601	910 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	MEI1	Q5TIA1	1274 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	PPP1R42	Q7Z4L9	355 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	ERC1	Q8IUD2	1116 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	MRPL41	Q8IXM3	137 aa	Known RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	CNTROB	Q8N137	903 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	EVI5L	Q96CN4	794 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	TMEM87B	Q96K49	555 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	FEZ1	Q99689	392 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	TRIT1	Q9H3H1	467 aa	Known RBP	4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	DIAPH3	Q9NSV4	1193 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	ADAM30	Q9UKF2	790 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	KCNH3	Q9ULD8	1083 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	MYH7	P12883	1935 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	RGPD5	Q99666	1765 aa		4.25	□□□□□ -1.73
CSMD2-208	ENST00000471438	SPATA31A1	Q5TZJ5	1347 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	SPATA31A3	Q5VYP0	1347 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	QSER1	Q2KHR3	1735 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CASP8AP2	Q9UKL3	1982 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	GOLGA6L6	A8MZA4	724 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	RBAK-RBAKDN	I3L0D1	243 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	HRK	O00198	91 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	IRS4	O14654	1257 aa	Predicted RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	SURF6	O75683	361 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	KIF20A	O95235	890 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CCDC192	P0DO97	292 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TFE3	P19532	575 aa	Predicted RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	GDF5	P43026	501 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	KCNC1	P48547	511 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	ST13	P50502	369 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	GALK1	P51570	392 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	YARS	P54577	528 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CHMP4BP1	P59074	171 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	RPL6	Q02878	288 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CHRNE	Q04844	493 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	ST3GAL1	Q11201	340 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	ANKRD1	Q15327	319 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms