RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 SLC7A14Q8TBB6 771 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 DNAJC7Q99615 494 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 SLC52A2Q9HAB3 445 aa4.9□□□□□ -1.63
COPS3-206ENST00000471414 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.89□□□□□ -1.63
COPS3-206ENST00000471414 EFCAB14O75071 495 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 CLASP2O75122 1294 aaKnown RBP4.89□□□□□ -1.63
COPS3-206ENST00000471414 CRTAMO95727 393 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 KCNA6P17658 529 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 CSF2RBP32927 897 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 GJA4P35212 333 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 JAM2P57087 298 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 GUCY1A3Q02108 690 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 SEC23AQ15436 765 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 ZNF827Q17R98 1081 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 C2orf27AQ580R0 203 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 OSTM1Q86WC4 334 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 PTRH1Q86Y79 214 aaKnown RBP4.89□□□□□ -1.63
COPS3-206ENST00000471414 REXO1L1PQ8IX06 675 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 STPG3Q8N7X2 389 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 SCLYQ96I15 445 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 CELF4Q9BZC1 486 aaKnown RBP4.89□□□□□ -1.63
COPS3-206ENST00000471414 CD248Q9HCU0 757 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 SMPD4Q9NXE4 827 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 BTBD7Q9P203 1132 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 ARHGAP20Q9P2F6 1191 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 PCDHA9Q9Y5H5 950 aa4.89□□□□□ -1.63
COPS3-206ENST00000471414 CCDC163A0A0D9SF12 145 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 CCDC66A2RUB6 948 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 GPR42O15529 346 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 AOAHP28039 575 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 HERVK_113P62684 666 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 PPP2CBP62714 309 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 PPP2CAP67775 309 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 BTBD8Q5XKL5 378 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 FSTL4Q6MZW2 842 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 NOSTRINQ8IVI9 506 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
COPS3-206ENST00000471414 IPO9Q96P70 1041 aaKnown RBP4.88□□□□□ -1.63
COPS3-206ENST00000471414 MRPL4Q9BYD3 311 aaKnown RBP4.88□□□□□ -1.63
COPS3-206ENST00000471414 BARX1Q9HBU1 254 aaPredicted RBP4.88□□□□□ -1.63
COPS3-206ENST00000471414 TRIM39Q9HCM9 518 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 PPP1R1BQ9UD71 204 aaPredicted RBP4.88□□□□□ -1.63
COPS3-206ENST00000471414 ATP23Q9Y6H3 246 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 SLC4A7Q9Y6M7 1214 aa4.88□□□□□ -1.63
COPS3-206ENST00000471414 PATE3B3GLJ2 98 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 RASGRP1O95267 797 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 CNOT4O95628 575 aaKnown RBP4.87□□□□□ -1.63
COPS3-206ENST00000471414 MPIG6BO95866 241 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 ZNF20P17024 532 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 TOP3AQ13472 1001 aaPredicted RBP4.87□□□□□ -1.63
COPS3-206ENST00000471414 STILQ15468 1287 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 SLFN13Q68D06 897 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 OVCH1Q7RTY7 1134 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 LILRB2Q8N423 598 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 ZSWIM2Q8NEG5 633 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 SRPK1Q96SB4 655 aaKnown RBP4.87□□□□□ -1.63
COPS3-206ENST00000471414 TACO1Q9BSH4 297 aaKnown RBP4.87□□□□□ -1.63
COPS3-206ENST00000471414 SLC39A2Q9NP94 309 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 MYRFQ9Y2G1 1151 aa4.87□□□□□ -1.63
COPS3-206ENST00000471414 TCRBV16S1A1N1A0A5B0 115 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 H0Y858 1186 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 GSTA4O15217 222 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 FBXO21O94952 628 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 SRGAP2CP0DJJ0 459 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 GLRBP48167 497 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 CDSNQ15517 529 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 CRY1Q16526 586 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 CPZQ66K79 652 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 ABHD17CQ6PCB6 329 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 BORCS6Q96GS4 357 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 C8orf49Q96NF6 230 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 WWC2-AS2Q96NR7 200 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 OSBPL2Q9H1P3 480 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 NCOA5Q9HCD5 579 aaKnown RBP4.86□□□□□ -1.63
COPS3-206ENST00000471414 CATSPERZQ9NTU4 200 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 PTCH2Q9Y6C5 1203 aa4.86□□□□□ -1.63
COPS3-206ENST00000471414 CUTAO60888 179 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 PTGS1P23219 599 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 POLD1P28340 1107 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 ST5P78524 1137 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 ICAM4Q14773 271 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 R3HDM1Q15032 1099 aaKnown RBP4.85□□□□□ -1.63
COPS3-206ENST00000471414 ZXDCQ2QGD7 858 aaPredicted RBP4.85□□□□□ -1.63
COPS3-206ENST00000471414 FAM47CQ5HY64 1035 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 GLB1LQ6UWU2 654 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 ARHGEF18Q6ZSZ5 1173 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 CXXC5Q7LFL8 322 aaKnown RBP4.85□□□□□ -1.63
COPS3-206ENST00000471414 BRAPQ7Z569 592 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
COPS3-206ENST00000471414 ZC3H7AQ8IWR0 971 aaKnown RBP4.85□□□□□ -1.63
COPS3-206ENST00000471414 SREK1Q8WXA9 508 aaKnown RBP4.85□□□□□ -1.63
COPS3-206ENST00000471414 DLG3Q92796 817 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 WNK4Q96J92 1243 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 PTPN18Q99952 460 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 RIC8BQ9NVN3 520 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 NDOR1Q9UHB4 597 aa4.85□□□□□ -1.63
COPS3-206ENST00000471414 SFMBT1Q9UHJ3 866 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms