RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZCCHC11Q5TAX3 1644 aaKnown RBP7.4□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC141Q6ZP82 1450 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TCP10L2B9ZVM9 353 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 H0YIN7 160 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ENC1O14682 589 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 OSTNP61366 133 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 GPR162Q16538 588 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 KIAA1755Q5JYT7 1200 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 PKN3Q6P5Z2 889 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TLK2Q86UE8 772 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 CADPS2Q86UW7 1296 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 MCF2L2Q86YR7 1114 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 FAF2Q96CS3 445 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 RPAP3Q9H6T3 665 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGAP26Q9UNA1 814 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 UHRF1BP1LA0JNW5 1464 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC53A6NM62 1247 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TRIM32Q13049 653 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 MORF4L2Q15014 288 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 DNAJC24Q6P3W2 148 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 RASSF3Q86WH2 238 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 FBXO18Q8NFZ0 1043 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 GJA10Q969M2 543 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 CENPTQ96BT3 561 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 GINS4Q9BRT9 223 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 H0Y626 953 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 GYG2O15488 501 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 DEAF1O75398 565 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TRIM16O95361 564 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TCP1P17987 556 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ITGA6P23229 1130 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 RAB14P61106 215 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 PSMD2Q13200 908 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 SMAD1Q15797 465 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TEDDM1Q5T9Z0 273 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGAP17Q68EM7 881 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 DDIASQ8IXT1 998 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 APPL2Q8NEU8 664 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 NDEL1Q9GZM8 345 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 BCL2L12Q9HB09 334 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 NDFIP2Q9NV92 336 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ASAP2O43150 1006 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TAF5LO75529 589 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 CD58P19256 250 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 S100A5P33763 92 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 RWDD2BP57060 319 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 DYNC1I2Q13409 638 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ACCSLQ4AC99 568 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 SLC44A4Q53GD3 710 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 KRT40Q6A162 431 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 HIBCHQ6NVY1 386 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 NEK8Q86SG6 692 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 VMP1Q96GC9 406 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 FAM167BQ9BTA0 163 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 FSD1LQ9BXM9 530 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 NXF1Q9UBU9 619 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ANGEL1Q9UNK9 670 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 APOBEC2Q9Y235 224 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 NBPF26B4DH59 902 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TMEM232C9JQI7 657 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 H7C1D1 291 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 MED7O43513 233 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 ZBED1O96006 694 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 SCG2P13521 617 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 POU5F1BQ06416 359 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 TTC23LQ6PF05 361 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 RFX8Q6ZV50 586 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 PLA2G4DQ86XP0 818 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 SLFN12Q8IYM2 578 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 CMTR1Q8N1G2 835 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 C1orf131Q8NDD1 294 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 INPP5DQ92835 1189 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 SNX21Q969T3 373 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 VPS39Q96JC1 886 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 PSTPIP2Q9H939 334 aa7.39□□□□□ -1.23
BRCA1-210ENST00000471181 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
BRCA1-210ENST00000471181 UBN2Q6ZU65 1347 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 C5orf58C9J3I9 102 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 UBAP1LF5GYI3 381 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 HNRNPDLO14979 420 aaKnown RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CAPN1P07384 714 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 TFAMQ00059 246 aaKnown RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC74AQ0VAA2 488 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 AOC3Q16853 763 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ARL13BQ3SXY8 428 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 TAS2R42Q7RTR8 314 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CCHCR1Q8TD31 782 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CHURC1Q8WUH1 139 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 TRIM11Q96F44 468 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 FAM161BQ96MY7 647 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 FHDC1Q9C0D6 1143 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 PCIF1Q9H4Z3 704 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 PARVGQ9HBI0 331 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 USP40Q9NVE5 1235 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms