RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ZC3H7AQ8IWR0 971 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-206ENST00000471167 LCORQ96JN0 433 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-206ENST00000471167 MPIG6BO95866 241 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 CELA3BP08861 270 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 ENO2P09104 434 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 EFEMP1Q12805 493 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 FIGNQ5HY92 759 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 CPZQ66K79 652 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 TRMT10BQ6PF06 316 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 HHIPL2Q6UWX4 724 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 CISD2Q8N5K1 135 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 DRC1Q96MC2 740 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 KRTAP4-2Q9BYR5 136 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 ZSWIM4Q9H7M6 989 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 L2HGDHQ9H9P8 463 aa7.6□□□□□ -1.19
PRPF40A-206ENST00000471167 RASSF10A6NK89 507 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 PPP1R12AO14974 1030 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 EFCAB14O75071 495 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 ITGB3P05106 788 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 SMAD2Q15796 467 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 CRY1Q16526 586 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 IGDCC4Q8TDY8 1250 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 SH3TC2Q8TF17 1288 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 MAGEB10Q96LZ2 347 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 PTPN18Q99952 460 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 TACO1Q9BSH4 297 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 CELF4Q9BZC1 486 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 TMEM168Q9H0V1 697 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 RIC8BQ9NVN3 520 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 ARHGAP20Q9P2F6 1191 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 SFMBT1Q9UHJ3 866 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 ATP23Q9Y6H3 246 aa7.59□□□□□ -1.19
PRPF40A-206ENST00000471167 CCDC163A0A0D9SF12 145 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 CLASP2O75122 1294 aaKnown RBP7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 ZBTB48P10074 688 aaPredicted RBP7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 MC4RP32245 332 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 MECP2P51608 486 aaKnown RBP7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 PLP2Q04941 152 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 NFATC3Q12968 1075 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 NLGN4XQ8N0W4 816 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 DLG3Q92796 817 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 PPP4R1LQ9P1A2 415 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 NUB1Q9Y5A7 615 aa7.58□□□□□ -1.2
PRPF40A-206ENST00000471167 PLD2O14939 933 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 PLATP00750 562 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 NAT1P18440 290 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 SDSP20132 328 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 ST5P78524 1137 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 NFE2L2Q16236 605 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 Q6ZUG5 572 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 LGI4Q8N135 537 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 IGSF22Q8N9C0 903 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 UBXN4Q92575 508 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 RNPC3Q96LT9 517 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 ADAM29Q9UKF5 820 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 PTPN22Q9Y2R2 807 aa7.57□□□□□ -1.2
PRPF40A-206ENST00000471167 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 AOAHP28039 575 aa7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 LIMS2Q7Z4I7 341 aa7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 KLHL36Q8N4N3 616 aa7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 AJUBAQ96IF1 538 aa7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 WRNIP1Q96S55 665 aa7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 KRTAP4-11Q9BYQ6 195 aa7.56□□□□□ -1.2
PRPF40A-206ENST00000471167 FAM83GA6ND36 823 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 DVL2O14641 736 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 CHGBP05060 677 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 MMEP08473 750 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 CSF2RBP32927 897 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 ZNF460Q14592 562 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 TMEM177Q53S58 311 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 FAM47CQ5HY64 1035 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 LRSAM1Q6UWE0 723 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 KBTBD2Q8IY47 623 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 KATNBL1Q9H079 304 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 B3GALT1Q9Y5Z6 326 aa7.55□□□□□ -1.2
PRPF40A-206ENST00000471167 ESYT3A0FGR9 886 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 SCDO00767 359 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 CYP7B1O75881 506 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 GJA4P35212 333 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 IL13RA1P78552 427 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 OTOP1Q7RTM1 612 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 PRRT2Q7Z6L0 340 aaPredicted RBP7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 FTSJ1Q9UET6 329 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 ZDHHC9Q9Y397 364 aa7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 TNPO3Q9Y5L0 923 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-206ENST00000471167 TRAF5O00463 557 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 GSTA4O15217 222 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 GPR42O15529 346 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 B4GALT4O60513 344 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 GLRX3O76003 335 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 CNOT4O95628 575 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 ZNF888P0CJ79 500 aaPredicted RBP7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 PTGS1P23219 599 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 HERVK_113P62684 666 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms