RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 MTFR1LQ9H019 292 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 NCOA5Q9HCD5 579 aaKnown RBP3.89□□□□□ -1.79
UBXN4-206ENST00000470687 C11orf21Q9P2W6 132 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 SUGT1Q9Y2Z0 365 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 SF3B6Q9Y3B4 125 aaKnown RBP3.89□□□□□ -1.79
UBXN4-206ENST00000470687 SIT1Q9Y3P8 196 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 TELO2Q9Y4R8 837 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 CD2APQ9Y5K6 639 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 DIP2BQ9P265 1576 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 KDM6BO15054 1643 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 EEA1Q15075 1411 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 MUSKO15146 869 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 RAPGEF3O95398 923 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 TGFB2P61812 414 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 FHL2Q14192 279 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 ZNF460Q14592 562 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 SMN1Q16637 294 aaKnown RBP3.88□□□□□ -1.79
UBXN4-206ENST00000470687 LONRF2Q1L5Z9 754 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 TM4SF20Q53R12 229 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 PLEKHG4Q58EX7 1191 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 SOGA3Q5TF21 947 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 EEF1DP3Q658K8 133 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 NSMFQ6X4W1 530 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 NOP9Q86U38 636 aaKnown RBP3.88□□□□□ -1.79
UBXN4-206ENST00000470687 STK32CQ86UX6 486 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 MIB1Q86YT6 1006 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 MBD6Q96DN6 1003 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 GBP3Q9H0R5 595 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 FANCLQ9NW38 375 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 GULP1Q9UBP9 304 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 TCAF1Q9Y4C2 921 aa3.88□□□□□ -1.79
UBXN4-206ENST00000470687 MAGI3Q5TCQ9 1506 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 DISP1Q96F81 1524 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 TRBV23-1A0A0A0MS06 115 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 TRAV20A0A0B4J274 112 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 PLEKHD1A6NEE1 506 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 PATE3B3GLJ2 98 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 RASGRP1O95267 797 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 AMY2AP04746 511 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 SNRPB2P08579 225 aaKnown RBP3.87□□□□□ -1.79
UBXN4-206ENST00000470687 ZNF28P17035 718 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 AMY2BP19961 511 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 FPR2P25090 351 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 EPHB4P54760 987 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 INHBEP58166 350 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 SEC23AQ15436 765 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 HABP4Q5JVS0 413 aaKnown RBP3.87□□□□□ -1.79
UBXN4-206ENST00000470687 ACBD5Q5T8D3 534 aaPredicted RBP3.87□□□□□ -1.79
UBXN4-206ENST00000470687 CREB3L3Q68CJ9 461 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 SDE2Q6IQ49 451 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 STYK1Q6J9G0 422 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 CD300LDQ6UXZ3 194 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 ZNF575Q86XF7 245 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 SEMA4AQ9H3S1 761 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 TESMINQ9Y4I5 508 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 SBNO2Q9Y2G9 1366 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 CD109Q6YHK3 1445 aa3.87□□□□□ -1.79
UBXN4-206ENST00000470687 PRXQ9BXM0 1461 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 WDR7Q9Y4E6 1490 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 EPRSP07814 1512 aaKnown RBP3.86□□□□□ -1.79
UBXN4-206ENST00000470687 ASMTLO95671 621 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 NTRK1P04629 796 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 BCL6P41182 706 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PPP2CBP62714 309 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PPP2CAP67775 309 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 HSP90AA2PQ14568 343 aaPredicted RBP3.86□□□□□ -1.79
UBXN4-206ENST00000470687 NFE2L2Q16236 605 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PKN3Q6P5Z2 889 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 BRAPQ7Z569 592 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 DCP2Q8IU60 420 aaKnown RBP3.86□□□□□ -1.79
UBXN4-206ENST00000470687 SCUBE1Q8IWY4 988 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PPIL6Q8IXY8 311 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PCDH19Q8TAB3 1148 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PPP1R14AQ96A00 147 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 GPATCH3Q96I76 525 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 ZNF341Q9BYN7 854 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBXN4-206ENST00000470687 PCDHA9Q9Y5H5 950 aa3.86□□□□□ -1.79
UBXN4-206ENST00000470687 ARAP3Q8WWN8 1544 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 TCRBV16S1A1N1A0A5B0 115 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 NPIPB8E9PQR5 432 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 ARVCFO00192 962 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 ZNF623O75123 536 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 MECP2P51608 486 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 PURAQ00577 322 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 PABPC4Q13310 644 aaKnown RBP eCLIP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 ADAM9Q13443 819 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 SEPT7Q16181 437 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 LBX2Q6XYB7 198 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 ZC3H18Q86VM9 953 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 TEX2Q8IWB9 1127 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 LRRC47Q8N1G4 583 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 USP33Q8TEY7 942 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 CHFRQ96EP1 664 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 MRFAP1L1Q96HT8 127 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 YTHDC1Q96MU7 727 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 PHF20Q9BVI0 1012 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 WDR26Q9H7D7 661 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 CBLCQ9ULV8 474 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms