RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 PCMTD1Q96MG8 357 aaPredicted RBP18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 NACC1Q96RE7 527 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 MAP7D2Q96T17 732 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 BHMT2Q9H2M3 363 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 ZHX3Q9H4I2 956 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 NFIBO00712 420 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 TRIM21P19474 475 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 GNG11P61952 73 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 CTTNQ14247 550 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 TPH2Q8IWU9 490 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 NEK9Q8TD19 979 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 TSC1Q92574 1164 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 ERO1AQ96HE7 468 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 REEP2Q9BRK0 252 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 IPO5O00410 1097 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 MARSP56192 900 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 RAD51AP2Q09MP3 1159 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 MEA1Q16626 185 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 PCNX4Q63HM2 1172 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 RINT1Q6NUQ1 792 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 EPM2AIP1Q7L775 607 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 SYTL5Q8TDW5 730 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 FGFBP2Q9BYJ0 223 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 UNC45AQ9H3U1 944 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 MRPL44Q9H9J2 332 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 COL20A1Q9P218 1284 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 UBIAD1Q9Y5Z9 338 aa18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-206ENST00000470588 COG2Q14746 738 aa18.72■□□□□ 0.59
SMARCD3-206ENST00000470588 NELFCDQ8IXH7 590 aa18.72■□□□□ 0.59
SMARCD3-206ENST00000470588 CHP1Q99653 195 aa18.72■□□□□ 0.59
SMARCD3-206ENST00000470588 EDEM3Q9BZQ6 932 aa18.72■□□□□ 0.59
SMARCD3-206ENST00000470588 SIK3Q9Y2K2 1263 aa18.72■□□□□ 0.59
SMARCD3-206ENST00000470588 MYPNQ86TC9 1320 aa18.72■□□□□ 0.59
SMARCD3-206ENST00000470588 VWA5AO00534 786 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 CETN3O15182 167 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 CHMP2AO43633 222 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 TBCAO75347 108 aaKnown RBP18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 ITGB5P18084 799 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 OAZ1P54368 228 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 CDK17Q00537 523 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 PPATQ06203 517 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 KNOP1Q1ED39 458 aaKnown RBP18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 DLK2Q6UY11 383 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 C1orf186Q6ZWK4 172 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 SFR1Q86XK3 245 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 ERO1BQ86YB8 467 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 RUSC1Q9BVN2 902 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 JADE2Q9NQC1 790 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 KCND2Q9NZV8 630 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 TRAF3IP3Q9Y228 551 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 FRMPD4Q14CM0 1322 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 PTPRFP10586 1907 aa18.71■□□□□ 0.59
SMARCD3-206ENST00000470588 DSG3P32926 999 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 KLK7P49862 253 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 ADAM9Q13443 819 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 BMT2Q1RMZ1 405 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 TKFCQ3LXA3 575 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 WDR59Q6PJI9 974 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 CATSPERGQ6ZRH7 1159 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 PIGOQ8TEQ8 1089 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 ANKRD7Q92527 254 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 ATG4CQ96DT6 458 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 TRERF1Q96PN7 1200 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 AGPAT5Q9NUQ2 364 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 HOXC10Q9NYD6 342 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 PDXKO00764 312 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 NKRFO15226 690 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 CALUO43852 315 aaPredicted RBP18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 KIF5CO60282 957 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 NDUFA10O95299 355 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 CCDC170Q8IYT3 715 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 ZFP91Q96JP5 570 aaPredicted RBP18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 TAAR1Q96RJ0 339 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 OLFML3Q9NRN5 406 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 KCNH7Q9NS40 1196 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 ZNF215Q9UL58 517 aaPredicted RBP18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 FAM184BQ9ULE4 1060 aa18.7■□□□□ 0.58
SMARCD3-206ENST00000470588 LOC285556D6RIA3 1793 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 COL11A1P12107 1806 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 URI1O94763 535 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 FAM13AO94988 1023 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 RPS6P62753 249 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 SLC30A10Q6XR72 485 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 ZNF710Q8N1W2 664 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 WDR24Q96S15 920 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 AGO4Q9HCK5 861 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 SEL1LQ9UBV2 794 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 ADAMTS5Q9UNA0 930 aa18.69■□□□□ 0.58
SMARCD3-206ENST00000470588 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 RRP9O43818 475 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms