RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SYNPO2Q9UMS6 1093 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 GUCA1BQ9UMX6 200 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 PCDHA12Q9UN75 941 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 ANO9A1A5B4 782 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 CCDC66A2RUB6 948 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 MYMKA6NI61 221 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 SPDYE3A6NKU9 549 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 EIF3CLB5ME19 914 aaKnown RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 ADAMTS3O15072 1205 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 TBX3O15119 743 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 TACC1O75410 805 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 TDP2O95551 362 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 SSBP05455 408 aaKnown RBP eCLIP8.85□□□□□ -0.999e-17■■■■■ 55.5
SMC4-212ENST00000470240 PNMA6AP0CW24 399 aaPredicted RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 SHMT1P34896 483 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 SCNN1DP51172 638 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 PTK2Q05397 1052 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 CDC37Q16543 378 aaPredicted RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 MEA1Q16626 185 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 TMEM119Q4V9L6 283 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 STRIP1Q5VSL9 837 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 SLFN13Q68D06 897 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 STYK1Q6J9G0 422 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 CC2D1AQ6P1N0 951 aaPredicted RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 VASH1Q7L8A9 365 aaPredicted RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 CACNA2D4Q7Z3S7 1137 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 CAGE1Q8TC20 777 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 EPS8L1Q8TE68 723 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.995e-7■□□□□ 10.1
SMC4-212ENST00000470240 CDK15Q96Q40 435 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 EIF3CQ99613 913 aaKnown RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 DUSP9Q99956 384 aaKnown RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 AMNQ9BXJ7 453 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 TANGO6Q9C0B7 1094 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 JMJD4Q9H9V9 463 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 SLC39A2Q9NP94 309 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 ATP13A2Q9NQ11 1180 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 MYO6Q9UM54 1294 aa8.85□□□□□ -0.99
SMC4-212ENST00000470240 GREB1LQ9C091 1923 aaPredicted RBP8.85□□□□□ -0.99
SMC4-212ENST00000470240 POTECB2RU33 542 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 H0YIN7 160 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 PSMD14O00487 310 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 SLC37A4O43826 429 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 FCER1AP12319 257 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
SMC4-212ENST00000470240 FKBP3Q00688 224 aaKnown RBP8.84□□□□□ -0.99
SMC4-212ENST00000470240 ICA1Q05084 483 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 STK4Q13043 487 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 FAM26FQ5R3K3 315 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 HYIQ5T013 277 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 CC2D2BQ6DHV5 1058 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 DYMQ7RTS9 669 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 HDXQ7Z353 690 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 IRF2BP1Q8IU81 584 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 KCTD17Q8N5Z5 321 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 HNRNPLLQ8WVV9 542 aaKnown RBP8.84□□□□□ -0.99
SMC4-212ENST00000470240 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 MKL1Q969V6 931 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 SLC10A4Q96EP9 437 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 MMTAG2Q9BU76 263 aaKnown RBP8.84□□□□□ -0.99
SMC4-212ENST00000470240 C1QTNF2Q9BXJ5 285 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 PARD6BQ9BYG5 372 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 ZMYND15Q9H091 742 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 NDST4Q9H3R1 872 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 MMRN2Q9H8L6 949 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 ARHGEF10LQ9HCE6 1279 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 PANK4Q9NVE7 773 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 GMPR2Q9P2T1 348 aaKnown RBP8.84□□□□□ -0.99
SMC4-212ENST00000470240 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
SMC4-212ENST00000470240 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 FAM184BQ9ULE4 1060 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 PCDHA1Q9Y5I3 950 aa8.84□□□□□ -0.99
SMC4-212ENST00000470240 COL2A1P02458 1487 aaPredicted RBP8.83□□□□□ -1
SMC4-212ENST00000470240 PITPNM2Q9BZ72 1349 aa8.83□□□□□ -1
SMC4-212ENST00000470240 ARFGEF1Q9Y6D6 1849 aa8.83□□□□□ -1
SMC4-212ENST00000470240 AKR1B10O60218 316 aa8.83□□□□□ -1
SMC4-212ENST00000470240 ZRANB2O95218 330 aaKnown RBP eCLIP8.83□□□□□ -1
SMC4-212ENST00000470240 MMP10P09238 476 aa8.83□□□□□ -1
SMC4-212ENST00000470240 FSHRP23945 695 aa8.83□□□□□ -1
SMC4-212ENST00000470240 VAV2P52735 878 aa8.83□□□□□ -1
SMC4-212ENST00000470240 COASYQ13057 564 aa8.83□□□□□ -1
SMC4-212ENST00000470240 UBE2SQ16763 222 aa8.83□□□□□ -1
SMC4-212ENST00000470240 ABCB5Q2M3G0 1257 aa8.83□□□□□ -1
SMC4-212ENST00000470240 QRICH1Q2TAL8 776 aa8.83□□□□□ -1
SMC4-212ENST00000470240 HSP90B2PQ58FF3 399 aa8.83□□□□□ -1
SMC4-212ENST00000470240 TAF3Q5VWG9 929 aa8.83□□□□□ -1
SMC4-212ENST00000470240 APOBEC3HQ6NTF7 200 aaKnown RBP8.83□□□□□ -1
SMC4-212ENST00000470240 STXBP4Q6ZWJ1 553 aa8.83□□□□□ -1
SMC4-212ENST00000470240 KCTD1Q719H9 257 aa8.83□□□□□ -1
SMC4-212ENST00000470240 FBXO11Q86XK2 927 aa8.83□□□□□ -1
SMC4-212ENST00000470240 C2CD5Q86YS7 1000 aa8.83□□□□□ -1
SMC4-212ENST00000470240 CERS5Q8N5B7 392 aa8.83□□□□□ -1
SMC4-212ENST00000470240 CCDC155Q8N6L0 562 aa8.83□□□□□ -1
SMC4-212ENST00000470240 KIAA0895Q8NCT3 520 aa8.83□□□□□ -1
SMC4-212ENST00000470240 MSANTD4Q8NCY6 345 aa8.83□□□□□ -1
SMC4-212ENST00000470240 GMCL1P1Q8NEA9 526 aa8.83□□□□□ -1
SMC4-212ENST00000470240 TRIM58Q8NG06 486 aa8.83□□□□□ -1
SMC4-212ENST00000470240 SECISBP2LQ93073 1101 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms