RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MARK3P27448 753 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 HTRA4P83105 476 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-208ENST00000469802 MGAT3Q09327 533 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 NTRK3Q16288 839 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 MARCH8Q5T0T0 291 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 SEPT8Q92599 483 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 GLG1Q92896 1179 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 ZBED2Q9BTP6 218 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 TUBE1Q9UJT0 475 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-208ENST00000469802 MUC3AQ02505 3323 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 XIRP2A4UGR9 3374 aa18.61■□□□□ 0.57
COL9A3-208ENST00000469802 IGLV3-22A0A075B6J6 115 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 ADAMTS3O15072 1205 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 PRPF3O43395 683 aaKnown RBP18.6■□□□□ 0.57
COL9A3-208ENST00000469802 CHRNA1P02708 482 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 AMHP03971 560 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 PSMA5P28066 241 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 ACTR2P61160 394 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 GRB10Q13322 594 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 SP7Q8TDD2 431 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-208ENST00000469802 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
COL9A3-208ENST00000469802 APBB2Q92870 758 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 SDF4Q9BRK5 362 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 TTC3P53804 2025 aa18.6■□□□□ 0.57
COL9A3-208ENST00000469802 EVPLQ92817 2033 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 KIAA1671Q9BY89 1806 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-208ENST00000469802 FAM86B1E9PN63 330 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 GTPBP6O43824 516 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-208ENST00000469802 ATG7O95352 703 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 CYP3A4P08684 503 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 FAM86B2P0C5J1 330 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 ERVK-21P61565 698 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 JAKMIP3Q5VZ66 844 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 KRT40Q6A162 431 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 MYOCDQ8IZQ8 938 aa18.59■□□□□ 0.57
COL9A3-208ENST00000469802 RNF26Q9BY78 433 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-208ENST00000469802 BRWD1Q9NSI6 2320 aa18.58■□□□□ 0.57
COL9A3-208ENST00000469802 NCOR1O75376 2440 aa18.58■□□□□ 0.57
COL9A3-208ENST00000469802 IGKV6D-21A0A0A0MT36 114 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 CCNE2O96020 404 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 INSRRP14616 1297 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 IFNAR1P17181 557 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 FAM117BQ6P1L5 589 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 PLPPR4Q7Z2D5 763 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 REXO1Q8N1G1 1221 aaKnown RBP18.58■□□□□ 0.56
COL9A3-208ENST00000469802 MICALL1Q8N3F8 863 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 CCDC12Q8WUD4 166 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-208ENST00000469802 PHKBQ93100 1093 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 ASB2Q96Q27 587 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 TGS1Q96RS0 853 aaKnown RBP18.58■□□□□ 0.56
COL9A3-208ENST00000469802 IFIH1Q9BYX4 1025 aaKnown RBP18.58■□□□□ 0.56
COL9A3-208ENST00000469802 ZSWIM6Q9HCJ5 1215 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 INSL6Q9Y581 213 aa18.58■□□□□ 0.56
COL9A3-208ENST00000469802 TCF20Q9UGU0 1960 aaKnown RBP18.58■□□□□ 0.56
COL9A3-208ENST00000469802 RRN3P2A6NIE6 340 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 DHX15O43143 795 aaKnown RBP18.57■□□□□ 0.56
COL9A3-208ENST00000469802 RPLP2P05387 115 aaKnown RBP18.57■□□□□ 0.56
COL9A3-208ENST00000469802 PDIA3P30101 505 aaKnown RBP18.57■□□□□ 0.56
COL9A3-208ENST00000469802 TOB2Q14106 344 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-208ENST00000469802 PLCB4Q15147 1175 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 MCTP2Q6DN12 878 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 RUFY3Q7L099 469 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 GDPD5Q8WTR4 605 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 TOP1MTQ969P6 601 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 AZI2Q9H6S1 392 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 C6orf50Q9HD87 102 aa18.57■□□□□ 0.56
COL9A3-208ENST00000469802 GHRP10912 638 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 STAT5BP51692 787 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 MRPS5P82675 430 aaKnown RBP18.56■□□□□ 0.56
COL9A3-208ENST00000469802 LPIN1Q14693 890 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 RSPH3Q86UC2 560 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 PLA2G4DQ86XP0 818 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 DNAJB3Q8WWF6 145 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 ZBTB10Q96DT7 871 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 SUGCTQ9HAC7 445 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
COL9A3-208ENST00000469802 LMCD1Q9NZU5 365 aa18.56■□□□□ 0.56
COL9A3-208ENST00000469802 GNA11P29992 359 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 ZNF76P36508 570 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 SLC26A2P50443 739 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 IGBP1P78318 339 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 MRPS6P82932 125 aaKnown RBP18.55■□□□□ 0.56
COL9A3-208ENST00000469802 SETQ01105 290 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-208ENST00000469802 FBXO47Q5MNV8 452 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 CCDC148Q8NFR7 591 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 LENG9Q96B70 501 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 TM6SF1Q9BZW5 370 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 TSPYL2Q9H2G4 693 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-208ENST00000469802 MTUS1Q9ULD2 1270 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 TRPC6Q9Y210 931 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 CDY2AQ9Y6F7 541 aa18.55■□□□□ 0.56
COL9A3-208ENST00000469802 IPO5O00410 1097 aaKnown RBP18.54■□□□□ 0.56
COL9A3-208ENST00000469802 CIITAP33076 1130 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 TSHZ1Q6ZSZ6 1077 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 CCDC60Q8IWA6 550 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-208ENST00000469802 RASGRP4Q8TDF6 673 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 TRAPPC12Q8WVT3 735 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms