RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TMEM150BA6NC51 233 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.75
TOP3A-203ENST00000469739 NMT1P30419 496 aaKnown RBP10.4□□□□□ -0.75
TOP3A-203ENST00000469739 CASP4P49662 377 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 ZBED6P86452 979 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 PPARDQ03181 441 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 TMEM119Q4V9L6 283 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 LRRC55Q6ZSA7 311 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 SRGAP1Q7Z6B7 1085 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 CCDC65Q8IXS2 484 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 GUF1Q8N442 669 aaKnown RBP10.4□□□□□ -0.75
TOP3A-203ENST00000469739 DCAF4Q8WV16 495 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 C7orf43Q8WVR3 580 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 MMS19Q96T76 1030 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 DNAJC7Q99615 494 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 IFIH1Q9BYX4 1025 aaKnown RBP10.4□□□□□ -0.75
TOP3A-203ENST00000469739 EHD4Q9H223 541 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 GJA3Q9Y6H8 435 aa10.4□□□□□ -0.75
TOP3A-203ENST00000469739 ABCB11O95342 1321 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 SIPA1L1O43166 1804 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 CTAGE15A4D2H0 777 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 hCG_1984214I3L0E3 225 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 CTAGE8P0CG41 777 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 CYLC1P35663 651 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-203ENST00000469739 TRIM14Q14142 442 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 MAN2A1Q16706 1144 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 GJB7Q6PEY0 223 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 CTAGE6Q86UF2 777 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 CTAGE4Q8IX94 777 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 ZNF713Q8N859 430 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-203ENST00000469739 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 PACSIN2Q9UNF0 486 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-203ENST00000469739 SAMM50Q9Y512 469 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.39□□□□□ -0.75
TOP3A-203ENST00000469739 CAPN6Q9Y6Q1 641 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 GREB1LQ9C091 1923 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-203ENST00000469739 PVALEFA0A1B0GWK0 134 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 A0A1W2PQC6 194 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 OAS2P29728 719 aaKnown RBP10.39□□□□□ -0.75
TOP3A-203ENST00000469739 KIF5AQ12840 1032 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 STYK1Q6J9G0 422 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 FAM133AQ8N9E0 248 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 DYDC2Q96IM9 177 aa10.39□□□□□ -0.75
TOP3A-203ENST00000469739 ARP10275 920 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 SLC9A1P19634 815 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 KIF11P52732 1056 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 FKBP3Q00688 224 aaKnown RBP10.38□□□□□ -0.75
TOP3A-203ENST00000469739 KCNMA1Q12791 1236 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 COG2Q14746 738 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 SKIDA1Q1XH10 827 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 RSBN1LQ6PCB5 846 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-203ENST00000469739 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 GPATCH11Q8N954 259 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 MKL1Q969V6 931 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 LENG9Q96B70 501 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ELMO3Q96BJ8 720 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 MTMR8Q96EF0 704 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 WDR18Q9BV38 432 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ZNF341Q9BYN7 854 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 MAGEF1Q9HAY2 307 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ARFGAP3Q9NP61 516 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 KCNMB3Q9NPA1 279 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 COL4A3BPQ9Y5P4 624 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ALAS1P13196 640 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 VSNL1P62760 191 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 LRCH2Q5VUJ6 765 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-203ENST00000469739 MYCT1Q8N699 235 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ETNPPLQ8TBG4 499 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ARHGEF10LQ9HCE6 1279 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ADAMTS1Q9UHI8 967 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 SALL4Q9UJQ4 1053 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 KRT86O43790 486 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 INPP5BP32019 993 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 MAGEA1P43355 309 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 C2orf54Q08AI8 447 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 DLK2Q6UY11 383 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 RSRC2Q7L4I2 434 aaKnown RBP10.38□□□□□ -0.75
TOP3A-203ENST00000469739 PROCA1Q8NCQ7 364 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-203ENST00000469739 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ANKZF1Q9H8Y5 726 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 ABCB6Q9NP58 842 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 SIK3Q9Y2K2 1263 aa10.38□□□□□ -0.75
TOP3A-203ENST00000469739 NFIBO00712 420 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 TBCAO75347 108 aaKnown RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 TUBB4AP04350 444 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 CYP2J2P51589 502 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 CXCL9Q07325 125 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 GIT2Q14161 759 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 TTC31Q49AM3 519 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 NFRKBQ6P4R8 1299 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 SGSM3Q96HU1 749 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 UBXN6Q9BZV1 441 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 RAVER2Q9HCJ3 691 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms