RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 H0YGN5 161 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 WNT7AO00755 349 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 ZNF185O15231 689 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 USO1O60763 962 aaKnown RBP10.58□□□□□ -0.72
HDAC3-205ENST00000469550 COBLO75128 1261 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 TACC1O75410 805 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-205ENST00000469550 PPARAQ07869 468 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 C2orf54Q08AI8 447 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 FAM110CQ1W6H9 321 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 KCNV1Q6PIU1 500 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 GSPT2Q8IYD1 628 aaKnown RBP10.58□□□□□ -0.72
HDAC3-205ENST00000469550 SPATA4Q8NEY3 305 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 GDAP1L1Q96MZ0 367 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDAC3-205ENST00000469550 TOMM22Q9NS69 142 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 HERC5Q9UII4 1024 aaKnown RBP10.58□□□□□ -0.72
HDAC3-205ENST00000469550 GDAQ9Y2T3 454 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 SLC4A4Q9Y6R1 1079 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-205ENST00000469550 TNKSO95271 1327 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
HDAC3-205ENST00000469550 PSMA7O14818 248 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 ADCY3O60266 1144 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 HSF2BPO75031 334 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 RHOBTB3O94955 611 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 LCA5LO95447 670 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 SLURP2P0DP57 97 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 PCP11498 1178 aaKnown RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 CAP2P40123 477 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 PPP1R2P41236 205 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 GCLCP48506 637 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 FNTAP49354 379 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 FLT3LGP49771 235 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 PPP4CP60510 307 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 TTI2Q6NXR4 508 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 MICALCLQ6ZW33 695 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 CATIPQ7Z7H3 387 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 FAM114A1Q8IWE2 563 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 ERGIC2Q96RQ1 377 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 LRRC1Q9BTT6 524 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 GINM1Q9NU53 330 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 DOCK3Q8IZD9 2030 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 LOC102724159A0A0B4J2E5 919 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 TNPO2O14787 897 aaKnown RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 PRKAB2O43741 272 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 DDAH1O94760 285 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 CHRM1P11229 460 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 PLCG2P16885 1265 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 PABPC4Q13310 644 aaKnown RBP eCLIP10.57□□□□□ -0.726e-8■■■□□ 17.1
HDAC3-205ENST00000469550 PWP2Q15269 919 aaKnown RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 SPA17Q15506 151 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 IL17AQ16552 155 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 CD302Q8IX05 232 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 LCORLQ8N3X6 602 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 ZNF280CQ8ND82 737 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 CABS1Q96KC9 395 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 ZSCAN10Q96SZ4 725 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 HTATIP2Q9BUP3 242 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 WDR18Q9BV38 432 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 RNF208Q9H0X6 261 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 UNC93B1Q9H1C4 597 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 DHX36Q9H2U1 1008 aaKnown RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 AGPAT5Q9NUQ2 364 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 STIM2Q9P246 746 aa10.57□□□□□ -0.72
HDAC3-205ENST00000469550 DMGDHQ9UI17 866 aaKnown RBP10.57□□□□□ -0.72
HDAC3-205ENST00000469550 CENPFP49454 3210 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 NDUFAB1O14561 156 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 KLRC4O43908 158 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 KIAA0754O94854 1291 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 SGPL1O95470 568 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 STAT6P42226 847 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 MNAT1P51948 309 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 SETQ01105 290 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TBC1D8BQ0IIM8 1120 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TROAPQ12815 778 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TTMPQ5BVD1 217 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TMTC3Q6ZXV5 915 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TEX2Q8IWB9 1127 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TEX11Q8IYF3 940 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 MREGQ8N565 214 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 C4orf32Q8N8J7 132 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 U2AF1L4Q8WU68 220 aaKnown RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 CCDC42Q96M95 316 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 RUFY1Q96T51 708 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 SH2D4AQ9H788 454 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PAK6Q9NQU5 681 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TFR2Q9UP52 801 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms