RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 RWDD3Q9Y3V2 267 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 NCOR1O75376 2440 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 PRRC2BQ5JSZ5 2229 aaKnown RBP12.53□□□□□ -0.4
COL4A3-204ENST00000469504 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
COL4A3-204ENST00000469504 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-204ENST00000469504 IER5Q5VY09 327 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-204ENST00000469504 FBXO22Q8NEZ5 403 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 FTHL17Q9BXU8 183 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 ANO3Q9BYT9 981 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-204ENST00000469504 NID2Q14112 1375 aa12.52□□□□□ -0.41
COL4A3-204ENST00000469504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-204ENST00000469504 M0QZ92 97 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 STXBP3O00186 592 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 MEIS1O00470 390 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 ATG7O95352 703 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 CHRNA1P02708 482 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 GNA11P29992 359 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL4A3-204ENST00000469504 STAT5BP51692 787 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 SETQ01105 290 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-204ENST00000469504 MGAT3Q09327 533 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-204ENST00000469504 TIGD5Q53EQ6 642 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 NME8Q8N427 588 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 GDPD5Q8WTR4 605 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
COL4A3-204ENST00000469504 BRPF3Q9ULD4 1205 aa12.51□□□□□ -0.41
COL4A3-204ENST00000469504 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 H3BNC9 293 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 REC8O95072 547 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 RB1P06400 928 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 CYP3A4P08684 503 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 MARK3P27448 753 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 PSMA5P28066 241 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 HSPA4P34932 840 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 ACTR2P61160 394 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 MRPS6P82932 125 aaKnown RBP12.5□□□□□ -0.41
COL4A3-204ENST00000469504 ADCK5Q3MIX3 580 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 EPC2Q52LR7 807 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 MARCH8Q5T0T0 291 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 FAM160B1Q5W0V3 765 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 ZMYND12Q9H0C1 365 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
COL4A3-204ENST00000469504 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-204ENST00000469504 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 PCDHA2Q9Y5H9 948 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
COL4A3-204ENST00000469504 COL1A2P08123 1366 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 KDM3AQ9Y4C1 1321 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 IGKV6D-21A0A0A0MT36 114 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 SMIM35A0A1B0GVV1 85 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 C5orf67F2Z3F1 127 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 NCK2O43639 380 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 GHRP10912 638 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 SCG2P13521 617 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 INSRRP14616 1297 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 CDC27P30260 824 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF76P36508 570 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 TFF2Q03403 129 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 LPIN1Q14693 890 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
COL4A3-204ENST00000469504 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 ODR4Q5SWX8 454 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 KRT40Q6A162 431 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 RUFY4Q6ZNE9 571 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 SPRED2Q7Z698 418 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 TMEM192Q8IY95 271 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 DNAJB3Q8WWF6 145 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 PCYT2Q99447 389 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 C17orf80Q9BSJ5 609 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 C1QTNF1Q9BXJ1 281 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 AGXT2Q9BYV1 514 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 LMAN2LQ9H0V9 348 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 PKD2L1Q9P0L9 805 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
COL4A3-204ENST00000469504 COL4A4P53420 1690 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 POTEB3A0JP26 581 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms