RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 FOSL2P15408 326 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 AK2P54819 239 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 WDR5P61964 334 aaKnown RBP20.77■□□□□ 0.92
PHGDH-204ENST00000469443 SCRN1Q12765 414 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 TCTN1Q2MV58 587 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 PLPPR4Q7Z2D5 763 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 PCDHA4Q9UN74 947 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 IPO5O00410 1097 aaKnown RBP20.76■□□□□ 0.91
PHGDH-204ENST00000469443 DHX15O43143 795 aaKnown RBP20.76■□□□□ 0.91
PHGDH-204ENST00000469443 EFCAB14O75071 495 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 CTSHP09668 335 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 MYOGP15173 224 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 STAT5BP51692 787 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 IKBKEQ14164 716 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 TAF2Q6P1X5 1199 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 HERC6Q8IVU3 1022 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 TNPO1Q92973 898 aaKnown RBP20.76■□□□□ 0.91
PHGDH-204ENST00000469443 ZNF577Q9BSK1 485 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 C22orf23Q9BZE7 217 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 TBC1D22BQ9NU19 505 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 TUBE1Q9UJT0 475 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 EYSQ5T1H1 3165 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 CHD7Q9P2D1 2997 aa20.76■□□□□ 0.91
PHGDH-204ENST00000469443 IGKV6D-21A0A0A0MT36 114 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 MBLAC1A4D2B0 266 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-204ENST00000469443 RRN3P2A6NIE6 340 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 SEC24BO95487 1268 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 CCNE2O96020 404 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 PRR16Q569H4 304 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 FAM26DQ5JW98 314 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 PPP2R2DQ66LE6 453 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 ABHD15Q6UXT9 468 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 DAGLBQ8NCG7 672 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 SLC17A8Q8NDX2 589 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 MAFAQ8NHW3 353 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-204ENST00000469443 AIFM3Q96NN9 605 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 STK36Q9NRP7 1315 aa20.75■□□□□ 0.91
PHGDH-204ENST00000469443 KIF28PB7ZC32 967 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 INSRRP14616 1297 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 SLC26A2P50443 739 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 USP11P51784 963 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 PLEKHG4Q58EX7 1191 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 MARCH8Q5T0T0 291 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 FAM160B1Q5W0V3 765 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 GALNT17Q6IS24 598 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 RUFY4Q6ZNE9 571 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 RPAINQ86UA6 219 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 RSPH3Q86UC2 560 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 BLIDQ8IZY5 108 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 DBF4BQ8NFT6 615 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 LENG9Q96B70 501 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 UIMC1Q96RL1 719 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 PRDM12Q9H4Q4 367 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 TRPC6Q9Y210 931 aa20.74■□□□□ 0.91
PHGDH-204ENST00000469443 M0R2N6 131 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 BACH1O14867 736 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 EDIL3O43854 480 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 CA3P07451 260 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 IGBP1P78318 339 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 DEFB103AP81534 67 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 NPY5RQ15761 445 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 ZNF746Q6NUN9 644 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-204ENST00000469443 TBCKQ8TEA7 893 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 GAS2L1Q99501 681 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-204ENST00000469443 TCEAL9Q9UHQ7 104 aa20.73■□□□□ 0.91
PHGDH-204ENST00000469443 POTEB3A0JP26 581 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 RBAK-RBAKDNI3L0D1 243 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 KRT76Q01546 638 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 MIS18BP1Q6P0N0 1132 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 POTEBQ6S5H4 581 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 CCDC60Q8IWA6 550 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-204ENST00000469443 SEPT8Q92599 483 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 ZNF302Q9NR11 478 aa20.72■□□□□ 0.91
PHGDH-204ENST00000469443 TLL1O43897 1013 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 CTDNEP1O95476 244 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 CHRNA1P02708 482 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 RPLP2P05387 115 aaKnown RBP20.71■□□□□ 0.91
PHGDH-204ENST00000469443 XBP1P17861 261 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 NEK4P51957 841 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 MKRN4PQ13434 485 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-204ENST00000469443 SMAP1Q8IYB5 467 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-204ENST00000469443 DNAJB3Q8WWF6 145 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 PHF20Q9BVI0 1012 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 OSBPL7Q9BZF2 842 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 KCNJ14Q9UNX9 436 aa20.71■□□□□ 0.91
PHGDH-204ENST00000469443 TRANK1O15050 2925 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 MSH4O15457 936 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 HBP1O60381 514 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 LARGE1O95461 756 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 MGAT3Q09327 533 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 ME3Q16798 604 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 SWSAP1Q6NVH7 229 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 PDXDC2PQ6P474 469 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 TMCO2Q7Z6W1 182 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-204ENST00000469443 ATP8B4Q8TF62 1192 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 TRAPPC12Q8WVT3 735 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 ZBTB10Q96DT7 871 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 ZBED2Q9BTP6 218 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 PCDHA2Q9Y5H9 948 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms