RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 DDAH1O94760 285 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 HS1BP3Q53T59 392 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 ANKS3Q6ZW76 656 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 PRPF38AQ8NAV1 312 aaKnown RBP6.08□□□□□ -1.44
SCFD1-205ENST00000469043 TMEM145Q8NBT3 493 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 SNTG2Q9NY99 539 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 ADAM29Q9UKF5 820 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 TESMINQ9Y4I5 508 aa6.08□□□□□ -1.44
SCFD1-205ENST00000469043 SLPIP03973 132 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 RALBP1Q15311 655 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 FXNQ16595 210 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 HSP90AB4PQ58FF6 505 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 VASNQ6EMK4 673 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 PTPN18Q99952 460 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 SLC6A20Q9NP91 592 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 DLL4Q9NR61 685 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 TYW1Q9NV66 732 aaKnown RBP6.07□□□□□ -1.44
SCFD1-205ENST00000469043 FANCLQ9NW38 375 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 ASH2LQ9UBL3 628 aa6.07□□□□□ -1.44
SCFD1-205ENST00000469043 AGRPO00253 132 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 PRC1O43663 620 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 FBXO21O94952 628 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 CHGBP05060 677 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 ETFBP38117 255 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 RHBDL3P58872 404 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 BIRC2Q13490 618 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 ODR4Q5SWX8 454 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 TTLL11Q8NHH1 800 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 SH3TC2Q8TF17 1288 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 KCTD13Q8WZ19 329 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 DEPDC7Q96QD5 511 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 UBA5Q9GZZ9 404 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 SEC61A2Q9H9S3 476 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 NUB1Q9Y5A7 615 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 NPFFR2Q9Y5X5 522 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 MRVI1Q9Y6F6 885 aa6.06□□□□□ -1.44
SCFD1-205ENST00000469043 FAM221BA6H8Z2 402 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 HMGB1P1B2RPK0 211 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-205ENST00000469043 CENPBP07199 599 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-205ENST00000469043 GYS2P54840 703 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 RASA3Q14644 834 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 SMAD2Q15796 467 aaKnown RBP6.05□□□□□ -1.44
SCFD1-205ENST00000469043 SLC35F1Q5T1Q4 408 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 DENND5AQ6IQ26 1287 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 Q6ZUG5 572 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 RALYLQ86SE5 291 aaKnown RBP6.05□□□□□ -1.44
SCFD1-205ENST00000469043 NUDT10Q8NFP7 164 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 Q8TCH9 128 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 APPBP2Q92624 585 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 NUDT11Q96G61 164 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 MENTQ9BUN1 341 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 EPN3Q9H201 632 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 SLITRK6Q9H5Y7 841 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 KANSL2Q9H9L4 492 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 GEMIN8Q9NWZ8 242 aaKnown RBP6.05□□□□□ -1.44
SCFD1-205ENST00000469043 WASF3Q9UPY6 502 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 HS3ST3A1Q9Y663 406 aa6.05□□□□□ -1.44
SCFD1-205ENST00000469043 B2RBV5 119 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 OVOL3O00110 214 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 SLC27A2O14975 620 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 KLF4O43474 513 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 KLHL18O94889 574 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 GRIN1Q05586 938 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 RAB33AQ14088 237 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 EEPD1Q7L9B9 569 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 DTX3Q8N9I9 347 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 PIP4K2CQ8TBX8 421 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 CLEC4DQ8WXI8 215 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 SGSM3Q96HU1 749 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 RPS6KC1Q96S38 1066 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 CEP89Q96ST8 783 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 IER2Q9BTL4 223 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 JAM3Q9BX67 310 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 GPR27Q9NS67 375 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 RBPJLQ9UBG7 517 aa6.04□□□□□ -1.44
SCFD1-205ENST00000469043 CCDC85CA6NKD9 419 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-205ENST00000469043 COL6A1P12109 1028 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 MAP4K2Q12851 820 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 R3HDM1Q15032 1099 aaKnown RBP6.03□□□□□ -1.44
SCFD1-205ENST00000469043 SPDYAQ5MJ70 313 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 SPTY2D1Q68D10 685 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-205ENST00000469043 TSHZ1Q6ZSZ6 1077 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 LRP10Q7Z4F1 713 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 HOMER1Q86YM7 354 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 IFNL2Q8IZJ0 200 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
SCFD1-205ENST00000469043 EVI5LQ96CN4 794 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 C1orf159Q96HA4 380 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 LMF1Q96S06 567 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 ZNF341Q9BYN7 854 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 MEGF9Q9H1U4 602 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 PRKAG3Q9UGI9 489 aa6.03□□□□□ -1.44
SCFD1-205ENST00000469043 R3HCC1Q9Y3T6 440 aaKnown RBP6.03□□□□□ -1.44
SCFD1-205ENST00000469043 ESYT3A0FGR9 886 aa6.02□□□□□ -1.45
SCFD1-205ENST00000469043 CNOT4O95628 575 aaKnown RBP6.02□□□□□ -1.45
SCFD1-205ENST00000469043 CKMP06732 381 aa6.02□□□□□ -1.45
SCFD1-205ENST00000469043 FAHP16930 419 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms