RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 KCNH7Q9NS40 1196 aa12.73□□□□□ -0.37
COL4A6-205ENST00000468338 H3BRB1 525 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 CPLX1O14810 134 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 EDIL3O43854 480 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 SORBS3O60504 671 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 DEXIO95424 95 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 ZNF286BP0CG31 522 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 CYP2C9P11712 490 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 ARHGAP4P98171 946 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
COL4A6-205ENST00000468338 NPY5RQ15761 445 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 KIAA0753Q2KHM9 967 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 TMEM240Q5SV17 173 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 JAKMIP3Q5VZ66 844 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
COL4A6-205ENST00000468338 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
COL4A6-205ENST00000468338 POTEHQ6S545 545 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 TRIM22Q8IYM9 498 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 REXO1Q8N1G1 1221 aaKnown RBP12.72□□□□□ -0.37
COL4A6-205ENST00000468338 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 TET1Q8NFU7 2136 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 PPP1R13LQ8WUF5 828 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 TUT1Q9H6E5 874 aaKnown RBP12.72□□□□□ -0.37
COL4A6-205ENST00000468338 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 VPS54Q9P1Q0 977 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
COL4A6-205ENST00000468338 KAT6AQ92794 2004 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 NFASCO94856 1347 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 STK36Q9NRP7 1315 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 IGLV3-22A0A075B6J6 115 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 GSTTP1A0A1W2PQM5 241 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 M0R2N6 131 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 NOP56O00567 594 aaKnown RBP12.71□□□□□ -0.37
COL4A6-205ENST00000468338 CTDNEP1O95476 244 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 ARP10275 920 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 CIITAP33076 1130 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 STK3Q13188 491 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 PTGISQ16647 500 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 ME3Q16798 604 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 BICD2Q8TD16 824 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 KIF2CQ99661 725 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL4A6-205ENST00000468338 SLKQ9H2G2 1235 aaPredicted RBP12.71□□□□□ -0.37
COL4A6-205ENST00000468338 IL23AQ9NPF7 189 aa12.71□□□□□ -0.37
COL4A6-205ENST00000468338 CDKL5O76039 1030 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 IQCF3P0C7M6 154 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 NEK4P51957 841 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 ADAM17P78536 824 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 BFSP2Q13515 415 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 PSRC1Q6PGN9 363 aaPredicted RBP12.7□□□□□ -0.38
COL4A6-205ENST00000468338 C7orf31Q8N865 590 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 RDH13Q8NBN7 331 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 DAGLBQ8NCG7 672 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 CAGE1Q8TC20 777 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
COL4A6-205ENST00000468338 DHX38Q92620 1227 aaKnown RBP12.7□□□□□ -0.38
COL4A6-205ENST00000468338 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 AGO4Q9HCK5 861 aaKnown RBP12.7□□□□□ -0.38
COL4A6-205ENST00000468338 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 SCN5AQ14524 2016 aa12.7□□□□□ -0.38
COL4A6-205ENST00000468338 DHX15O43143 795 aaKnown RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 LGR5O75473 907 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 ATG7O95352 703 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 LARGE1O95461 756 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 TCF7P36402 384 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 RBM25P49756 843 aaKnown RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 USP11P51784 963 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 CCL23P55773 120 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 PTK7Q13308 1070 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 ITGB3BPQ13352 177 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 GPNMBQ14956 572 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 TRIM71Q2Q1W2 868 aaKnown RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 TRIM50Q86XT4 487 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 RASGRP4Q8TDF6 673 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 HERVK_113Q902F9 699 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 RNPC3Q96LT9 517 aaKnown RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 JPH1Q9HDC5 661 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-205ENST00000468338 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 TANC1Q9C0D5 1861 aa12.69□□□□□ -0.38
COL4A6-205ENST00000468338 EMSYQ7Z589 1322 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 IGKV6D-21A0A0A0MT36 114 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 LILRB3O75022 631 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 AP1G2O75843 785 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 PFKMP08237 780 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 SMIM10L2AP0DMW4 78 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 SMIM10L2BP0DMW5 78 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 ACRP10323 421 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms