RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 C1orf131Q8NDD1 294 aaKnown RBP8.13□□□□□ -1.11
MSL3-210ENST00000468149 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 CXorf38Q8TB03 319 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 FAM126AQ9BYI3 521 aaPredicted RBP8.13□□□□□ -1.11
MSL3-210ENST00000468149 RIOX1Q9H6W3 641 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 INTUQ9ULD6 942 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 CCPG1Q9ULG6 757 aa8.13□□□□□ -1.11
MSL3-210ENST00000468149 COBLO75128 1261 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 SCGB1D2O95969 90 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 GJB1P08034 283 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 ALAS1P13196 640 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 CALRP27797 417 aaKnown RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 PMLP29590 882 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 RGS19P49795 217 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 RCAN1P53805 252 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 IFRD2Q12894 506 aaPredicted RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 MTFR1Q15390 333 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 CDC37Q16543 378 aaPredicted RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 CCL14Q16627 93 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 TMEM95Q3KNT9 176 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 ZNF792Q3KQV3 632 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 MEI1Q5TIA1 1274 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 ICE2Q659A1 982 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 CCDC174Q6PII3 467 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 BLOC1S2Q6QNY1 142 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 NFXL1Q6ZNB6 911 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 PACS2Q86VP3 889 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 GJD3Q8N144 294 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 ANKRD35Q8N283 1001 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 MTMR8Q96EF0 704 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 MAML3Q96JK9 1138 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 JAKMIP1Q96N16 626 aaKnown RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 SPON2Q9BUD6 331 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 AGXT2Q9BYV1 514 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 TM6SF1Q9BZW5 370 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 RNF208Q9H0X6 261 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 JMJD4Q9H9V9 463 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 PAK6Q9NQU5 681 aaPredicted RBP8.12□□□□□ -1.11
MSL3-210ENST00000468149 RNF146Q9NTX7 359 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 SLC12A7Q9Y666 1083 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 ALPK3Q96L96 1907 aa8.12□□□□□ -1.11
MSL3-210ENST00000468149 ZBTB5O15062 677 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 PGK2P07205 417 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 CCL5P13501 91 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 CASTP20810 708 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 RPS6KB1P23443 525 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 GNAQP50148 359 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 ST13P50502 369 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 CACNB2Q08289 660 aaPredicted RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 TRAF1Q13077 416 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 PPP2R5BQ15173 497 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 MFSD14CQ5VZR4 134 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 APOA5Q6Q788 366 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 MAMDC4Q6UXC1 1216 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 RUFY3Q7L099 469 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 DDX42Q86XP3 938 aaKnown RBP eCLIP8.11□□□□□ -1.11
MSL3-210ENST00000468149 MYO1HQ8N1T3 1032 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 NUP133Q8WUM0 1156 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 EMID1Q96A84 441 aaPredicted RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 SPZ1Q9BXG8 430 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 LRRC2Q9BYS8 371 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 CPVLQ9H3G5 476 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 A1CFQ9NQ94 594 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 FLRT1Q9NZU1 646 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 PRKAG3Q9UGI9 489 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 EFR3BQ9Y2G0 817 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 PDE4DIPQ5VU43 2346 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 CCDC163A0A0D9SF12 145 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 SMAPO00193 183 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 CYTH3O43739 400 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 DHX16O60231 1041 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 MSCO60682 206 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 SGPL1O95470 568 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 CTHP32929 405 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 SNAP25P60880 206 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 QRICH1Q2TAL8 776 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 INO80DQ53TQ3 878 aaPredicted RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 L1TD1Q5T7N2 865 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 FAM133AQ8N9E0 248 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 FANCBQ8NB91 859 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 TCEANC2Q96MN5 208 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 AMNQ9BXJ7 453 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 UNC93B1Q9H1C4 597 aa8.11□□□□□ -1.11
MSL3-210ENST00000468149 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
MSL3-210ENST00000468149 CYP39A1Q9NYL5 469 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms