RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 SLC26A4O43511 780 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 CABYRO75952 493 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 F2P00734 622 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 P4HBP07237 508 aaKnown RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 ASGR1P07306 291 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 UBA7P41226 1012 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 QARSP47897 775 aaKnown RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 STAT5BP51692 787 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 ACLYP53396 1101 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 PURAQ00577 322 aaKnown RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 GRIN1Q05586 938 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 UTP14CQ5TAP6 766 aaKnown RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 PLPPR4Q7Z2D5 763 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 CCDC60Q8IWA6 550 aaPredicted RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 MTG1Q9BT17 334 aaPredicted RBP17.07■□□□□ 0.32
SNIP1-202ENST00000468040 GDPD2Q9HCC8 539 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 GABBR1Q9UBS5 961 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 PCDHA7Q9UN72 937 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 TCHHQ07283 1943 aa17.07■□□□□ 0.32
SNIP1-202ENST00000468040 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 H3BRB1 525 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 MUTP22033 750 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 RPA1P27694 616 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 TXLNAP40222 546 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 PSMC5P62195 406 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 CXCL17Q6UXB2 119 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 ABHD8Q96I13 439 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 PCYT2Q99447 389 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 HSD17B14Q9BPX1 270 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 POLR3CQ9BUI4 534 aaPredicted RBP17.06■□□□□ 0.32
SNIP1-202ENST00000468040 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
SNIP1-202ENST00000468040 ZSWIM4Q9H7M6 989 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
SNIP1-202ENST00000468040 MAFBQ9Y5Q3 323 aaPredicted RBP17.06■□□□□ 0.32
SNIP1-202ENST00000468040 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 PP2D1A8MPX8 630 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 CCT6AP40227 531 aaKnown RBP17.05■□□□□ 0.32
SNIP1-202ENST00000468040 CYP4A11Q02928 519 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
SNIP1-202ENST00000468040 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 TNS4Q8IZW8 715 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 FAM167AQ96KS9 214 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 LXNQ9BS40 222 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 RGL1Q9NZL6 768 aa17.05■□□□□ 0.32
SNIP1-202ENST00000468040 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 SLITRK3O94933 977 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 CDC25AP30304 524 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 MFSD10Q14728 455 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 CABP7Q86V35 215 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 CATSPER3Q86XQ3 398 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 TPH2Q8IWU9 490 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 CKAP2LQ8IYA6 745 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 KCTD17Q8N5Z5 321 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 RASSF8Q8NHQ8 419 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 SYMPKQ92797 1274 aaKnown RBP17.04■□□□□ 0.32
SNIP1-202ENST00000468040 KAT2BQ92831 832 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
SNIP1-202ENST00000468040 NT5C3AQ9H0P0 336 aa17.04■□□□□ 0.32
SNIP1-202ENST00000468040 A0A1W2PQ27 194 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
SNIP1-202ENST00000468040 A0A1W2PQ64 194 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 A0A1W2PQD8 194 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 HAS3O00219 553 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 MED24O75448 989 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 LYPLA2O95372 231 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 OATP04181 439 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 SPATA31C1P0DKV0 1188 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 MARK3P27448 753 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 PSEN2P49810 448 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 PRKCEQ02156 737 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 CTTNQ14247 550 aaKnown RBP17.03■□□□□ 0.32
SNIP1-202ENST00000468040 UGCGQ16739 394 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 SHC4Q6S5L8 630 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 ATP8B4Q8TF62 1192 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 STARD7Q9NQZ5 370 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 CCDC39Q9UFE4 941 aa17.03■□□□□ 0.32
SNIP1-202ENST00000468040 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms