RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 NAV2Q8IVL1 2488 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 KCNK12Q9HB15 430 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 IGSF5Q9NSI5 407 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.21
VPS26A-204ENST00000467852 LHX6Q9UPM6 363 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 PCDHGA2Q9Y5H1 932 aa13.77□□□□□ -0.21
VPS26A-204ENST00000467852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-204ENST00000467852 WEE2P0C1S8 567 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 SMIM10L2AP0DMW4 78 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 SMIM10L2BP0DMW5 78 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
VPS26A-204ENST00000467852 N4BP2L1Q5TBK1 243 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-204ENST00000467852 KIAA1841Q6NSI8 718 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 OTOP3Q7RTS5 596 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 GPR20Q99678 358 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
VPS26A-204ENST00000467852 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 NGRNQ9NPE2 291 aaKnown RBP13.76□□□□□ -0.21
VPS26A-204ENST00000467852 ENTPD7Q9NQZ7 604 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
VPS26A-204ENST00000467852 RALGAPA1Q6GYQ0 2036 aa13.76□□□□□ -0.21
VPS26A-204ENST00000467852 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 HOXC8P31273 242 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS26A-204ENST00000467852 STXBP2Q15833 593 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
VPS26A-204ENST00000467852 PHLDB3Q6NSJ2 640 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-204ENST00000467852 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 PARD6AQ9NPB6 346 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 IGSF9Q9P2J2 1179 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 FBXO4Q9UKT5 387 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 PNMA2Q9UL42 364 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 CA14Q9ULX7 337 aa13.75□□□□□ -0.21
VPS26A-204ENST00000467852 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
VPS26A-204ENST00000467852 H3BRB1 525 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 GOLIM4O00461 696 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 LAMTOR5O43504 91 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 NARSO43776 548 aaKnown RBP13.74□□□□□ -0.21
VPS26A-204ENST00000467852 CHRNA1P02708 482 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 HOXD8P13378 290 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-204ENST00000467852 APOBRQ0VD83 1088 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 MAML2Q8IZL2 1156 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-204ENST00000467852 DNAJC2Q99543 621 aaKnown RBP13.74□□□□□ -0.21
VPS26A-204ENST00000467852 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
VPS26A-204ENST00000467852 LRFN2Q9ULH4 789 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 HCFC2Q9Y5Z7 792 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 MIA3Q5JRA6 1907 aa13.74□□□□□ -0.21
VPS26A-204ENST00000467852 POTEMA6NI47 508 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 HIDE1A8MVS5 230 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 C1QTNF9BB2RNN3 333 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 C1QTNF9P0C862 333 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 TSPY3P0CV98 308 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 TSPY8P0CW00 308 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 ADD2P35612 726 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 RING1Q06587 406 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 LPIN1Q14693 890 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
VPS26A-204ENST00000467852 UNC79Q9P2D8 2635 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 PRDM1O75626 825 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 CSTF1Q05048 431 aaKnown RBP13.72□□□□□ -0.21
VPS26A-204ENST00000467852 SLFNL1Q499Z3 407 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 PPP4R3BQ5MIZ7 849 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
VPS26A-204ENST00000467852 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
VPS26A-204ENST00000467852 IWS1Q96ST2 819 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■□□□□ 9
VPS26A-204ENST00000467852 SPATA6Q9NWH7 488 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-204ENST00000467852 ZSCAN32Q9NX65 697 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 RAB23Q9ULC3 237 aa13.72□□□□□ -0.21
VPS26A-204ENST00000467852 FNDC1Q4ZHG4 1894 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-204ENST00000467852 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 TAF4O00268 1085 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-204ENST00000467852 GATMP50440 423 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 CCDC96Q2M329 555 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 CCDC149Q6ZUS6 474 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 RASGRP2Q7LDG7 609 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 TMC7Q7Z402 723 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 AACSQ86V21 672 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 C12orf76Q8N812 135 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-204ENST00000467852 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms