RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 EXOSC10Q01780 885 aaKnown RBP24.08■■□□□ 1.45
COL9A3-207ENST00000467819 GPM6BQ13491 265 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 PTPROQ16827 1216 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 ADCK5Q3MIX3 580 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 PPP1R18Q6NYC8 613 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 DHX32Q7L7V1 743 aaKnown RBP24.08■■□□□ 1.45
COL9A3-207ENST00000467819 TMEM192Q8IY95 271 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 RASEFQ8IZ41 740 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 PCYT2Q99447 389 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 FAM49AQ9H0Q0 323 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-207ENST00000467819 AZI2Q9H6S1 392 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 CDY2AQ9Y6F7 541 aa24.08■■□□□ 1.45
COL9A3-207ENST00000467819 V9GY48 417 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-207ENST00000467819 GOLGA8AA7E2F4 631 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 GOLGA8BA8MQT2 603 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 INSRRP14616 1297 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 FUT2Q10981 343 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 CENPQQ7L2Z9 268 aaPredicted RBP24.07■■□□□ 1.44
COL9A3-207ENST00000467819 IL17RAQ96F46 866 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 SDF4Q9BRK5 362 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 ANO3Q9BYT9 981 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 NAP1L2Q9ULW6 460 aaPredicted RBP24.07■■□□□ 1.44
COL9A3-207ENST00000467819 TRPC6Q9Y210 931 aa24.07■■□□□ 1.44
COL9A3-207ENST00000467819 KIAA1671Q9BY89 1806 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.06■■□□□ 1.44
COL9A3-207ENST00000467819 KLF18A0A0U1RQI7 1052 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 RRN3P2A6NIE6 340 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 H3BNC9 293 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 STXBP3O00186 592 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 ARP10275 920 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 KCNA5P22460 613 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 FBXO47Q5MNV8 452 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 FIBCD1Q8N539 461 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 TMEM260Q9NX78 707 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 EVPLQ92817 2033 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 NFASCO94856 1347 aa24.06■■□□□ 1.44
COL9A3-207ENST00000467819 SMCO2A6NFE2 343 aa24.05■■□□□ 1.44
COL9A3-207ENST00000467819 FOSP01100 380 aaPredicted RBP24.05■■□□□ 1.44
COL9A3-207ENST00000467819 CTNNB1P35222 781 aa24.05■■□□□ 1.44
COL9A3-207ENST00000467819 ACTR2P61160 394 aa24.05■■□□□ 1.44
COL9A3-207ENST00000467819 MRPS6P82932 125 aaKnown RBP24.05■■□□□ 1.44
COL9A3-207ENST00000467819 TIGD5Q53EQ6 642 aa24.05■■□□□ 1.44
COL9A3-207ENST00000467819 TSHZ1Q6ZSZ6 1077 aa24.05■■□□□ 1.44
COL9A3-207ENST00000467819 TRAPPC12Q8WVT3 735 aa24.05■■□□□ 1.44
COL9A3-207ENST00000467819 MYH9P35579 1960 aaKnown RBP24.05■■□□□ 1.44
COL9A3-207ENST00000467819 hCG_1984214I3L0E3 225 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 CDC45O75419 566 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 CDC27P30260 824 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 ITGB3BPQ13352 177 aaPredicted RBP24.04■■□□□ 1.44
COL9A3-207ENST00000467819 PLCB4Q15147 1175 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 CEP55Q53EZ4 464 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 ZNF713Q8N859 430 aaPredicted RBP24.04■■□□□ 1.44
COL9A3-207ENST00000467819 BANK1Q8NDB2 785 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 C1QTNF1Q9BXJ1 281 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 AGO4Q9HCK5 861 aaKnown RBP24.04■■□□□ 1.44
COL9A3-207ENST00000467819 BARHL2Q9NY43 387 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 ADGRA3Q8IWK6 1321 aa24.04■■□□□ 1.44
COL9A3-207ENST00000467819 ENPP3O14638 875 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 CD52P31358 61 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 TMEM62Q0P6H9 643 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 KRT32Q14532 448 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 TSGA10IPQ3SY00 556 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 LEXMQ3ZCV2 418 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 EPHX3Q9H6B9 360 aa24.03■■□□□ 1.44
COL9A3-207ENST00000467819 AGO3Q9H9G7 860 aaKnown RBP24.03■■□□□ 1.44
COL9A3-207ENST00000467819 FAM217BQ9NTX9 383 aaPredicted RBP24.03■■□□□ 1.44
COL9A3-207ENST00000467819 DDX39AO00148 427 aaKnown RBP24.02■■□□□ 1.44
COL9A3-207ENST00000467819 ZNF76P36508 570 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 SREBF1P36956 1147 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 STAT5BP51692 787 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 FGD1P98174 961 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 AP3B2Q13367 1082 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 TCEAL5Q5H9L2 206 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 IER5Q5VY09 327 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 TEX2Q8IWB9 1127 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.02■■□□□ 1.44
COL9A3-207ENST00000467819 TNPO1Q92973 898 aaKnown RBP24.02■■□□□ 1.44
COL9A3-207ENST00000467819 TRPV2Q9Y5S1 764 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 WDR81Q562E7 1941 aa24.02■■□□□ 1.44
COL9A3-207ENST00000467819 M0QZ92 97 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 RPLP2P05387 115 aaKnown RBP24.01■■□□□ 1.43
COL9A3-207ENST00000467819 CPA1P15085 419 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 CLK2P49760 499 aaKnown RBP24.01■■□□□ 1.43
COL9A3-207ENST00000467819 JAKMIP3Q5VZ66 844 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 EP400NLQ6ZTU2 488 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 PLPPR4Q7Z2D5 763 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 LINC01599Q8WXQ3 324 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 KHSRPQ92945 711 aaKnown RBP eCLIP24.01■■□□□ 1.43
COL9A3-207ENST00000467819 GLT8D2Q9H1C3 349 aa24.01■■□□□ 1.43
COL9A3-207ENST00000467819 NSUN3Q9H649 340 aaKnown RBP24.01■■□□□ 1.43
COL9A3-207ENST00000467819 RC3H2Q9HBD1 1191 aaKnown RBP24.01■■□□□ 1.43
COL9A3-207ENST00000467819 POTEB3A0JP26 581 aa24■■□□□ 1.43
COL9A3-207ENST00000467819 MEIS1O00470 390 aa24■■□□□ 1.43
COL9A3-207ENST00000467819 ADD1P35611 737 aaKnown RBP24■■□□□ 1.43
COL9A3-207ENST00000467819 METAP2P50579 478 aaKnown RBP eCLIP24■■□□□ 1.43
COL9A3-207ENST00000467819 APOBRQ0VD83 1088 aa24■■□□□ 1.43
COL9A3-207ENST00000467819 BTG3Q14201 252 aaPredicted RBP24■■□□□ 1.43
COL9A3-207ENST00000467819 PTCRAQ6ISU1 281 aaPredicted RBP24■■□□□ 1.43
COL9A3-207ENST00000467819 POTEBQ6S5H4 581 aa24■■□□□ 1.43
COL9A3-207ENST00000467819 CD320Q9NPF0 282 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms