RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 MYH10P35580 1976 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 TLR2O60603 784 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 TNNI2P48788 182 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 CLK2P49760 499 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 JAG1P78504 1218 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 FKBP3Q00688 224 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 SLC7A5Q01650 507 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 RASSF7Q02833 373 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 COASYQ13057 564 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 GPIHBP1Q8IV16 184 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 MYOCDQ8IZQ8 938 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 HAS1Q92839 578 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 CAVIN3Q969G5 261 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 ZFP91Q96JP5 570 aaPredicted RBP16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 PSMB7Q99436 277 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 CEP72Q9P209 647 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 EPB41P11171 864 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 ERCC3P19447 782 aa16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 PAFAH1B1P43034 410 aa16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 MRPS25P82663 173 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 CDC37Q16543 378 aaPredicted RBP16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 GLE1Q53GS7 698 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 CCDC181Q5TID7 509 aa16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 RBM12Q9NTZ6 932 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 TSKSQ9UJT2 592 aa16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
PRPF38B-204ENST00000467302 NDUFB10O96000 172 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 SERPING1P05155 500 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 MATR3P43243 847 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 CORO7P57737 925 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 CXCL9Q07325 125 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 HYIQ5T013 277 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 FAM83BQ5T0W9 1011 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 TSEN2Q8NCE0 465 aaKnown RBP16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 RNF14Q9UBS8 474 aa16.21■□□□□ 0.19
PRPF38B-204ENST00000467302 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 MAGEA9P43362 315 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 MMP14P50281 582 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 IRAK1P51617 712 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 MARSP56192 900 aaKnown RBP16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 ALS2CLQ60I27 953 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 JDP2Q8WYK2 163 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 CEP63Q96MT8 703 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 PLEKHA4Q9H4M7 779 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 VEZTQ9HBM0 779 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 ARHGEF10LQ9HCE6 1279 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.18
PRPF38B-204ENST00000467302 BUB1O43683 1085 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 BMP3P12645 472 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 NNTQ13423 1086 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 CFAP221Q4G0U5 840 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 SFMBT2Q5VUG0 894 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 ZBED3Q96IU2 234 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 NLRC4Q9NPP4 1024 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 PANK4Q9NVE7 773 aa16.2■□□□□ 0.18
PRPF38B-204ENST00000467302 TRAF5O00463 557 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 TBC1D12O60347 775 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 NAB2Q15742 525 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 TDRD12Q587J7 1177 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 C8orf74Q6P047 294 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 GBP6Q6ZN66 633 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 TRIM59Q8IWR1 403 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 MS4A14Q96JA4 679 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 NAP1L4Q99733 375 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 FGFBP2Q9BYJ0 223 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 OPA1O60313 960 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 GNA14O95837 355 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 TNIP1Q15025 636 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 CCDC40Q4G0X9 1142 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 DNAJC21Q5F1R6 531 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 ZC3H3Q8IXZ2 948 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 AMNQ9BXJ7 453 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 GDF3Q9NR23 364 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 PCDHGC5Q9Y5F6 944 aa16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 GOLGB1Q14789 3259 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-204ENST00000467302 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L15C9J2P7 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L13C9JLJ4 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L11C9JVI0 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L18D6R9N7 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L22D6RA61 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L17D6RBQ6 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L19D6RCP7 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L20D6RJB6 530 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms