RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PTPN22Q9Y2R2 807 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 NUB1Q9Y5A7 615 aa4.84□□□□□ -1.63
GTF3C3-209ENST00000466862 TRBV23-1A0A0A0MS06 115 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 AQP7O14520 342 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 B4GALT4O60513 344 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 STK10O94804 968 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 PAK1Q13153 545 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 TOP3AQ13472 1001 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 GPR19Q15760 415 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 FAM209AQ5JX71 171 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 FSTL4Q6MZW2 842 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 DPH6Q7L8W6 267 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 Q8TCH9 128 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 PTPRN2Q92932 1015 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 KISS1RQ969F8 398 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 TACO1Q9BSH4 297 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 SMURF1Q9HCE7 757 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 SLC39A2Q9NP94 309 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 BTBD7Q9P203 1132 aa4.83□□□□□ -1.64
GTF3C3-209ENST00000466862 H0Y858 1186 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 FOXS1O43638 330 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 FBXO21O94952 628 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 MPIG6BO95866 241 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 C4BPAP04003 597 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 TACR2P21452 398 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 AOAHP28039 575 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 SSRP1Q08945 709 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 DUSP8Q13202 625 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 MTERF2Q49AM1 385 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 TM4SF20Q53R12 229 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 ZNF585AQ6P3V2 769 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 MTDHQ86UE4 582 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 SCAND2PQ9GZW5 306 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 PFDN2Q9UHV9 154 aa4.82□□□□□ -1.64
GTF3C3-209ENST00000466862 FAM153BP0C7A2 387 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 PYGMP11217 842 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 C6P13671 934 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 PDE6AP16499 860 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 POLD1P28340 1107 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 MC4RP32245 332 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 ETV4P43268 484 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 IL13RA1P78552 427 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 USP10Q14694 798 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 SEC23AQ15436 765 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 STILQ15468 1287 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 SPDYAQ5MJ70 313 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 TCTN3Q6NUS6 607 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 ARHGAP36Q6ZRI8 547 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 PTRH1Q86Y79 214 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 NOSTRINQ8IVI9 506 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 GSTCDQ8NEC7 633 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 SH3RF3Q8TEJ3 882 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 ZDHHC9Q9Y397 364 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 MRPS23Q9Y3D9 190 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 PCDHA8Q9Y5H6 950 aa4.81□□□□□ -1.64
GTF3C3-209ENST00000466862 MATN2O00339 956 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 MUSKO15146 869 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 CUTAO60888 179 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 ZNF623O75123 536 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 GJA4P35212 333 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 JAM2P57087 298 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 GABREP78334 506 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 LONRF2Q1L5Z9 754 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 TRIM61Q5EBN2 209 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 BTBD8Q5XKL5 378 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 PALM2Q8IXS6 379 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 NLGN4XQ8N0W4 816 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 JMYQ8N9B5 988 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 SLC16A11Q8NCK7 471 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 NEIL1Q96FI4 390 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 C8orf37Q96NL8 207 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 GNRHR2Q96P88 292 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 ZNF747Q9BV97 191 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 SIRPGQ9P1W8 387 aa4.8□□□□□ -1.64
GTF3C3-209ENST00000466862 FAM221BA6H8Z2 402 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 CLASP2O75122 1294 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 PTGS1P23219 599 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 ACVRL1P37023 503 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 HERVK_113P62684 666 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 KANK2Q63ZY3 851 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 C16orf59Q7L2K0 433 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 IFNL2Q8IZJ0 200 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 CFHR4Q92496 578 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 ARMC5Q96C12 935 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 LMF1Q96S06 567 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 SLC52A2Q9HAB3 445 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 JADE2Q9NQC1 790 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 RIC8BQ9NVN3 520 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 TCAF1Q9Y4C2 921 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 TESMINQ9Y4I5 508 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 ATP23Q9Y6H3 246 aa4.79□□□□□ -1.64
GTF3C3-209ENST00000466862 CCDC66A2RUB6 948 aa4.78□□□□□ -1.64
GTF3C3-209ENST00000466862 SUV39H1O43463 412 aa4.78□□□□□ -1.64
GTF3C3-209ENST00000466862 CRTAMO95727 393 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms