RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 NOSTRINQ8IVI9 506 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 IGDCC4Q8TDY8 1250 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 DDX1Q92499 740 aaKnown RBP5.81□□□□□ -1.48
VPS13D-203ENST00000466732 RELTQ969Z4 430 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 YTHDC1Q96MU7 727 aaKnown RBP5.81□□□□□ -1.48
VPS13D-203ENST00000466732 SLC39A2Q9NP94 309 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 ARHGAP20Q9P2F6 1191 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 ZFP69BQ9UJL9 534 aa5.81□□□□□ -1.48
VPS13D-203ENST00000466732 PRAMEF25A6NGN4 478 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 MROH6A6NGR9 719 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 C9orf118A6NHY6 69 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 SCDO00767 359 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 PRICKLE3O43900 615 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-203ENST00000466732 IL18BPO95998 194 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 ASLP04424 464 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 CYP1A1P04798 512 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-203ENST00000466732 IGFALSP35858 605 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 KIAA2012Q0VF49 1180 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 PABPC4Q13310 644 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS13D-203ENST00000466732 SMAD2Q15796 467 aaKnown RBP5.8□□□□□ -1.48
VPS13D-203ENST00000466732 ZFYVE27Q5T4F4 411 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 STPG3Q8N7X2 389 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 TMEM168Q9H0V1 697 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 KCND1Q9NSA2 647 aa5.8□□□□□ -1.48
VPS13D-203ENST00000466732 TNPO3Q9Y5L0 923 aaKnown RBP5.8□□□□□ -1.48
VPS13D-203ENST00000466732 SLC12A8A0AV02 714 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 B4E1Z4 1266 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 OPA1O60313 960 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 RFPL3O75679 317 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 FBXO21O94952 628 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 SDSP20132 328 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 CNR2P34972 360 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 ZNF460Q14592 562 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 TM4SF20Q53R12 229 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 ZCCHC8Q6NZY4 707 aaKnown RBP5.79□□□□□ -1.48
VPS13D-203ENST00000466732 DDX53Q86TM3 631 aaKnown RBP5.79□□□□□ -1.48
VPS13D-203ENST00000466732 FERMT3Q86UX7 667 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 HOMER1Q86YM7 354 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 SYNPOQ8N3V7 929 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 C2orf69Q8N8R5 385 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 CXorf38Q8TB03 319 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 LCORQ96JN0 433 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-203ENST00000466732 TACO1Q9BSH4 297 aaKnown RBP5.79□□□□□ -1.48
VPS13D-203ENST00000466732 SAMD15Q9P1V8 674 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 USP35Q9P2H5 1018 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 ARHGAP28Q9P2N2 729 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 FTSJ1Q9UET6 329 aa5.79□□□□□ -1.48
VPS13D-203ENST00000466732 M0R2C6 588 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 FOXD2O60548 495 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-203ENST00000466732 GLRX3O76003 335 aaKnown RBP5.78□□□□□ -1.48
VPS13D-203ENST00000466732 KLHL18O94889 574 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 KNG1P01042 644 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 CHGBP05060 677 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 AOAHP28039 575 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 MECP2P51608 486 aaKnown RBP5.78□□□□□ -1.48
VPS13D-203ENST00000466732 HERVK_113P62684 666 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 TCEA2Q15560 299 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 UBXN11Q5T124 520 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 FAM124AQ86V42 546 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 JAZF1Q86VZ6 243 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 NUDT10Q8NFP7 164 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 APPBP2Q92624 585 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 DLG3Q92796 817 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 MBD6Q96DN6 1003 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 NUDT11Q96G61 164 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 FANCLQ9NW38 375 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 BTBD7Q9P203 1132 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 CD2APQ9Y5K6 639 aa5.78□□□□□ -1.48
VPS13D-203ENST00000466732 MRPL42Q9Y6G3 142 aaKnown RBP5.78□□□□□ -1.48
VPS13D-203ENST00000466732 SYN1P17600 705 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 PTGS1P23219 599 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 MC4RP32245 332 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 PKN3Q6P5Z2 889 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 BORAQ6PGQ7 559 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 C16orf86Q6ZW13 317 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 OTOP1Q7RTM1 612 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 LGI4Q8N135 537 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 KLHL36Q8N4N3 616 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 KCNH7Q9NS40 1196 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 B3GALT1Q9Y5Z6 326 aa5.77□□□□□ -1.49
VPS13D-203ENST00000466732 H0Y858 1186 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 HIP1RO75146 1068 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 MMEP08473 750 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 ZBTB48P10074 688 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-203ENST00000466732 IRF9Q00978 393 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 NFATC3Q12968 1075 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 ARHGAP44Q17R89 818 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 TKFCQ3LXA3 575 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 PIK3R6Q5UE93 754 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 INCENPQ9NQS7 918 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 GALNT8Q9NY28 637 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 MAGEC2Q9UBF1 373 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-203ENST00000466732 INVSQ9Y283 1065 aa5.76□□□□□ -1.49
VPS13D-203ENST00000466732 RASSF10A6NK89 507 aa5.75□□□□□ -1.49
VPS13D-203ENST00000466732 TRAF5O00463 557 aa5.75□□□□□ -1.49
VPS13D-203ENST00000466732 FOXP2O15409 715 aa5.75□□□□□ -1.49
VPS13D-203ENST00000466732 B4GALT3O60512 393 aa5.75□□□□□ -1.49
VPS13D-203ENST00000466732 CDC45O75419 566 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms