RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
DNMT3A-208ENST00000466601 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
DNMT3A-208ENST00000466601 DAXXQ9UER7 740 aaPredicted RBP16.28■□□□□ 0.2
DNMT3A-208ENST00000466601 EVI5O60447 810 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 PQBP1O60828 265 aaKnown RBP16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 SLC26A2P50443 739 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 EPHA7Q15375 998 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 PDXDC2PQ6P474 469 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 SESTD1Q86VW0 696 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 FAM126BQ8IXS8 530 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 TOX2Q96NM4 488 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 MAFBQ9Y5Q3 323 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-208ENST00000466601 DCDC2CA8MYV0 355 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 BRD1O95696 1058 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 BMP15O95972 392 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 PRPHP41219 470 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 TECP42680 631 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 ATP2C1P98194 919 aaPredicted RBP16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 TMEM266Q2M3C6 531 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 C7orf61Q8IZ16 206 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
DNMT3A-208ENST00000466601 IGSF9BQ9UPX0 1349 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 B4GALT4O60513 344 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 CD4P01730 458 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 ATP4AP20648 1035 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 PLCB4Q15147 1175 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 UGCGQ16739 394 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 DTHD1Q6ZMT9 781 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 TNPO1Q92973 898 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 TRPV6Q9H1D0 765 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 CLIC4Q9Y696 253 aa16.25■□□□□ 0.19
DNMT3A-208ENST00000466601 POTEB3A0JP26 581 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 C17orf102A2RUQ5 167 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 POTEMA6NI47 508 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 HBP1O60381 514 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 P4HBP07237 508 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 CLTBP09497 229 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 PSMC5P62195 406 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 FAAP100Q0VG06 881 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 ARL6IP4Q66PJ3 421 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 POTEBQ6S5H4 581 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 ATP8B4Q8TF62 1192 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 ZNF396Q96N95 335 aaPredicted RBP16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 EIF2AK1Q9BQI3 630 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 TRMT13Q9NUP7 481 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 SETD4Q9NVD3 440 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 TRPC6Q9Y210 931 aa16.24■□□□□ 0.19
DNMT3A-208ENST00000466601 MKI67P46013 3256 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 NRCAMQ92823 1304 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 ZNF862O60290 1169 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 DKC1O60832 514 aaKnown RBP eCLIP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 GNAT1P11488 350 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 INSRRP14616 1297 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 DDIT3P35638 169 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 QARSP47897 775 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 ZNF200P98182 395 aaPredicted RBP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 PPFIA1Q13136 1202 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 HIC1Q14526 733 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 PDIA5Q14554 519 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 PTPAQ15257 358 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 IL17AQ16552 155 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 PTGISQ16647 500 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 NEK9Q8TD19 979 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 BBXQ8WY36 941 aaPredicted RBP16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 DYDC2Q96IM9 177 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 RAB34Q9BZG1 259 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 NRBP2Q9NSY0 501 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 RGL1Q9NZL6 768 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 NOD1Q9Y239 953 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 NR2E3Q9Y5X4 410 aa16.23■□□□□ 0.19
DNMT3A-208ENST00000466601 RRN3P2A6NIE6 340 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 SLITRK3O94933 977 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 OATP04181 439 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 HOXC8P31273 242 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 NUCB2P80303 420 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 PRKCEQ02156 737 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 CYP4A11Q02928 519 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 CTTNQ14247 550 aaKnown RBP16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 GRIK4Q16099 956 aa16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
DNMT3A-208ENST00000466601 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms