RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 UBIAD1Q9Y5Z9 338 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 USP2O75604 605 aaPredicted RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 HOXA7P31268 230 aaPredicted RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 DSG3P32926 999 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 HOXD13P35453 343 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 NAA30Q147X3 362 aaPredicted RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 EPHA7Q15375 998 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 CCDC40Q4G0X9 1142 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 CYP26C1Q6V0L0 522 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 TMTC1Q8IUR5 882 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 ERGIC2Q96RQ1 377 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 RMDN3Q96TC7 470 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 AGO4Q9HCK5 861 aaKnown RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 COL4A3BPQ9Y5P4 624 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 EPHB6O15197 1021 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 DHX15O43143 795 aaKnown RBP14.99□□□□□ -0.01
UBE4B-206ENST00000466379 MTMR1Q13613 665 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 C1orf186Q6ZWK4 172 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 MIER3Q7Z3K6 550 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 GPIHBP1Q8IV16 184 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 OR8K1Q8NGG5 319 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
UBE4B-206ENST00000466379 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 RIT2Q99578 217 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 IRX2Q9BZI1 471 aaPredicted RBP14.99□□□□□ -0.01
UBE4B-206ENST00000466379 JADE2Q9NQC1 790 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 PPP2R3BQ9Y5P8 575 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 FRMPD4Q14CM0 1322 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 GCNT3O95395 438 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 BCRP11274 1271 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 GNG11P61952 73 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 KCNA1Q09470 495 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 TMEM132BQ14DG7 1078 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 SUPT20HL1Q3ZLR7 823 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 ARHGEF16Q5VV41 709 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 EPM2AIP1Q7L775 607 aaPredicted RBP14.99□□□□□ -0.01
UBE4B-206ENST00000466379 WDR24Q96S15 920 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 DNAJC7Q99615 494 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 IKZF4Q9H2S9 585 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 PXMP2Q9NR77 195 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 TMOD4Q9NZQ9 345 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
UBE4B-206ENST00000466379 C19orf81C9J6K1 198 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 CTIFO43310 598 aaKnown RBP14.98□□□□□ -0.01
UBE4B-206ENST00000466379 PEX10O60683 326 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 FAM13AO94988 1023 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 VGLL4Q14135 290 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 PLS1Q14651 629 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 WDR59Q6PJI9 974 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 CATSPERGQ6ZRH7 1159 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.98□□□□□ -0.01
UBE4B-206ENST00000466379 SMCR8Q8TEV9 937 aaPredicted RBP14.98□□□□□ -0.01
UBE4B-206ENST00000466379 NACC1Q96RE7 527 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 PDCD2LQ9BRP1 358 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 FAM207AQ9NSI2 230 aaPredicted RBP14.98□□□□□ -0.01
UBE4B-206ENST00000466379 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
UBE4B-206ENST00000466379 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 SAMM50Q9Y512 469 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 SNCAIPQ9Y6H5 919 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 PHLPP2Q6ZVD8 1323 aa14.98□□□□□ -0.01
UBE4B-206ENST00000466379 TESPA1A2RU30 521 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 GOLGA6L9A6NEM1 432 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 ATP9AO75110 1047 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 KIF20AO95235 890 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 ABL1P00519 1130 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 NMT1P30419 496 aaKnown RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 ADAM9Q13443 819 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 COG2Q14746 738 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 NOL9Q5SY16 702 aaKnown RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 ZNF710Q8N1W2 664 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 MYCT1Q8N699 235 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 MMRN2Q9H8L6 949 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 WDR90Q96KV7 1748 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 KNOP1Q1ED39 458 aaKnown RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 FOXR2Q6PJQ5 311 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 MAEAQ7L5Y9 396 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 TRMT1LQ7Z2T5 733 aaKnown RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 KSR1Q8IVT5 923 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 CEP63Q96MT8 703 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 SH2D3AQ9BRG2 576 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 NUP58Q9BVL2 599 aa14.97□□□□□ -0.01
UBE4B-206ENST00000466379 ADARB2Q9NS39 739 aaKnown RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 MAP3K20Q9NYL2 800 aaKnown RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 ZNF215Q9UL58 517 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 V9GYY5 206 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-206ENST00000466379 FDX1P10109 184 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 NR2F2P24468 414 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 ZC2HC1CQ53FD0 456 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-206ENST00000466379 LRRN4CLQ8ND94 238 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 ADAMTS5Q9UNA0 930 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 TMEM150BA6NC51 233 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 SPDYE16A6NNV3 312 aaPredicted RBP14.96□□□□□ -0.01
UBE4B-206ENST00000466379 CLIC2O15247 247 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 ZBED6P86452 979 aa14.96□□□□□ -0.01
UBE4B-206ENST00000466379 TSR1Q2NL82 804 aaKnown RBP14.96□□□□□ -0.01
UBE4B-206ENST00000466379 TREML2Q5T2D2 321 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms