RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ARIH2O95376 493 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 RPA1P27694 616 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 LY6KQ17RY6 165 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 TPH2Q8IWU9 490 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 BANK1Q8NDB2 785 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 TSC1Q92574 1164 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 TBC1D22BQ9NU19 505 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 KBTBD4Q9NVX7 518 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 SAMM50Q9Y512 469 aa20.75■□□□□ 0.91
CAPN3-209ENST00000466222 MAFGO15525 162 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 BMP6P22004 513 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 DPYDQ12882 1025 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 NCAPHQ15003 741 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 HYIQ5T013 277 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 KANK3Q6NY19 840 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 ARMCX2Q7L311 632 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 CYFIP1Q7L576 1253 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 CCAR2Q8N163 923 aaKnown RBP20.74■□□□□ 0.91
CAPN3-209ENST00000466222 HOOK1Q9UJC3 728 aaKnown RBP20.74■□□□□ 0.91
CAPN3-209ENST00000466222 SMC2O95347 1197 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 CAP1Q01518 475 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 TRMT1LQ7Z2T5 733 aaKnown RBP20.74■□□□□ 0.91
CAPN3-209ENST00000466222 MIER3Q7Z3K6 550 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 SMAP1Q8IYB5 467 aaPredicted RBP20.74■□□□□ 0.91
CAPN3-209ENST00000466222 ERMNQ8TAM6 284 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 PIGOQ8TEQ8 1089 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 RAD54LQ92698 747 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 PYM1Q9BRP8 204 aaKnown RBP20.74■□□□□ 0.91
CAPN3-209ENST00000466222 XPO4Q9C0E2 1151 aaKnown RBP20.74■□□□□ 0.91
CAPN3-209ENST00000466222 IFNKQ9P0W0 207 aa20.74■□□□□ 0.91
CAPN3-209ENST00000466222 SARSP49591 514 aaKnown RBP20.73■□□□□ 0.91
CAPN3-209ENST00000466222 MORN1Q5T089 497 aa20.73■□□□□ 0.91
CAPN3-209ENST00000466222 HAUS3Q68CZ6 603 aa20.73■□□□□ 0.91
CAPN3-209ENST00000466222 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
CAPN3-209ENST00000466222 MAML3Q96JK9 1138 aa20.73■□□□□ 0.91
CAPN3-209ENST00000466222 SSBP05455 408 aaKnown RBP eCLIP20.72■□□□□ 0.91
CAPN3-209ENST00000466222 UBA1P22314 1058 aaKnown RBP20.72■□□□□ 0.91
CAPN3-209ENST00000466222 ICAM3P32942 547 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 ARID5BQ14865 1188 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 EPHA7Q15375 998 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 SPATA20Q8TB22 786 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 MORC4Q8TE76 937 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 MAN1B1Q9UKM7 699 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 LCTP09848 1927 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 RBBP6Q7Z6E9 1792 aaKnown RBP20.72■□□□□ 0.91
CAPN3-209ENST00000466222 CCP110O43303 1012 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 TRPA1O75762 1119 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 SNAI1O95863 264 aaPredicted RBP20.72■□□□□ 0.91
CAPN3-209ENST00000466222 UGCGQ16739 394 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 SMARCE1Q969G3 411 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 CDHR1Q96JP9 859 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 POLR3CQ9BUI4 534 aaPredicted RBP20.72■□□□□ 0.91
CAPN3-209ENST00000466222 FLRT1Q9NZU1 646 aa20.72■□□□□ 0.91
CAPN3-209ENST00000466222 BRCA2P51587 3418 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 KDM3AQ9Y4C1 1321 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 MYMKA6NI61 221 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 SLC15A5A6NIM6 579 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
CAPN3-209ENST00000466222 MYL5Q02045 173 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 CCL14Q16627 93 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 TMC6Q7Z403 805 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 COPS5Q92905 334 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 LXNQ9BS40 222 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 NT5C3AQ9H0P0 336 aa20.71■□□□□ 0.91
CAPN3-209ENST00000466222 JPH1Q9HDC5 661 aaPredicted RBP20.71■□□□□ 0.91
CAPN3-209ENST00000466222 ASB14A6NK59 587 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 PLA2G4BP0C869 781 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 FANCCQ00597 558 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 NCBP1Q09161 790 aaKnown RBP20.7■□□□□ 0.91
CAPN3-209ENST00000466222 GJC2Q5T442 439 aaPredicted RBP20.7■□□□□ 0.91
CAPN3-209ENST00000466222 NT5DC1Q5TFE4 455 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 SV2BQ7L1I2 683 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 DYMQ7RTS9 669 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 SH2D3AQ9BRG2 576 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 TRIM9Q9C026 710 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 CUEDC2Q9H467 287 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 POLD4Q9HCU8 107 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 CGNQ9P2M7 1197 aaKnown RBP20.7■□□□□ 0.91
CAPN3-209ENST00000466222 SLC9A2Q9UBY0 812 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 STK17AQ9UEE5 414 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 GJD2Q9UKL4 321 aa20.7■□□□□ 0.91
CAPN3-209ENST00000466222 NPHP3-ACAD11A0A0J9YXS1 232 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 TMEM150BA6NC51 233 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 TNPO2O14787 897 aaKnown RBP20.7■□□□□ 0.9
CAPN3-209ENST00000466222 GTPBP6O43824 516 aaPredicted RBP20.7■□□□□ 0.9
CAPN3-209ENST00000466222 ALDH1A1P00352 501 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 CYP2B6P20813 491 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 RAD51AP2Q09MP3 1159 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 MAP2K5Q13163 448 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 SMYD4Q8IYR2 804 aaPredicted RBP20.7■□□□□ 0.9
CAPN3-209ENST00000466222 KIF18AQ8NI77 898 aa20.7■□□□□ 0.9
CAPN3-209ENST00000466222 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.7■□□□□ 0.9
CAPN3-209ENST00000466222 DDX41Q9UJV9 622 aaKnown RBP20.7■□□□□ 0.9
CAPN3-209ENST00000466222 B4DLN1 442 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 ACTR2P61160 394 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 KRT76Q01546 638 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 CACNB1Q02641 598 aaPredicted RBP20.69■□□□□ 0.9
CAPN3-209ENST00000466222 PRAMEF19Q5SWL8 479 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 TAPT1Q6NXT6 567 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 USP6NLQ92738 828 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms