RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 EP400NLQ6ZTU2 488 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 KCTD1Q719H9 257 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 RBM12BQ8IXT5 1001 aaKnown RBP3.71□□□□□ -1.82
CCDC93-205ENST00000466171 IFNL3Q8IZI9 196 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 FUKQ8N0W3 1084 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 ZNF503Q96F45 646 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 SGSM3Q96HU1 749 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 ALG1Q9BT22 464 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 AARSD1Q9BTE6 412 aaKnown RBP3.71□□□□□ -1.82
CCDC93-205ENST00000466171 C12orf65Q9H3J6 166 aaKnown RBP3.71□□□□□ -1.82
CCDC93-205ENST00000466171 MSL2Q9HCI7 577 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 OAZ3Q9UMX2 235 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 ESYT3A0FGR9 886 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 DLX3O60479 287 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 CDC14BO60729 498 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 SOD2P04179 222 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 ZNF888P0CJ79 500 aaPredicted RBP3.7□□□□□ -1.82
CCDC93-205ENST00000466171 ETFBP38117 255 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 RPS19P39019 145 aaKnown RBP3.7□□□□□ -1.82
CCDC93-205ENST00000466171 GRIA2P42262 883 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 EPHA5P54756 1037 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 INHBEP58166 350 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 GPR85P60893 370 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 WDR72Q3MJ13 1102 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 C1orf210Q8IVY1 113 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 NLGN4XQ8N0W4 816 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 AMER2Q8N7J2 671 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 WDR48Q8TAF3 677 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.7□□□□□ -1.82
CCDC93-205ENST00000466171 MICAL1Q8TDZ2 1067 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 CHFRQ96EP1 664 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 OR14A2Q96R54 314 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 ARHGAP28Q9P2N2 729 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 FBXO10Q9UK96 956 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 NR2E1Q9Y466 385 aa3.7□□□□□ -1.82
CCDC93-205ENST00000466171 NKRFO15226 690 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 IL18BPO95998 194 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 CAPNS1P04632 268 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 FGFR1P11362 822 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 ERCC5P28715 1186 aaPredicted RBP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 RRADP55042 308 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 HHEXQ03014 270 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 DPTQ07507 201 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 IFRD2Q12894 506 aaPredicted RBP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 TOP3AQ13472 1001 aaPredicted RBP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 HABP4Q5JVS0 413 aaKnown RBP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 BTBD8Q5XKL5 378 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 EXTL1Q92935 676 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 CEP89Q96ST8 783 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 TRIM8Q9BZR9 551 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 AURKAIP1Q9NWT8 199 aaPredicted RBP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 PUF60Q9UHX1 559 aaKnown RBP3.69□□□□□ -1.82
CCDC93-205ENST00000466171 PTPN22Q9Y2R2 807 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 SLC30A1Q9Y6M5 507 aa3.69□□□□□ -1.82
CCDC93-205ENST00000466171 PRODHO43272 600 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 PPFIA2O75334 1257 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 HMGCRP04035 888 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 ADH4P08319 380 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 ETV4P43268 484 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 INHBCP55103 352 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 DBPQ10586 325 aaPredicted RBP3.68□□□□□ -1.82
CCDC93-205ENST00000466171 RNF151Q2KHN1 245 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 STYK1Q6J9G0 422 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 KCNT2Q6UVM3 1135 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 NSMFQ6X4W1 530 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 CXXC5Q7LFL8 322 aaKnown RBP3.68□□□□□ -1.82
CCDC93-205ENST00000466171 PLEKHG4BQ96PX9 1271 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 IPPKQ9H8X2 491 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 ZNF408Q9H9D4 720 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 RIC8BQ9NVN3 520 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 TELO2Q9Y4R8 837 aa3.68□□□□□ -1.82
CCDC93-205ENST00000466171 TRAV20A0A0B4J274 112 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 ACOT7O00154 380 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 ARHGAP6O43182 974 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 NARSO43776 548 aaKnown RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 APPP05067 770 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 PABPC1P11940 636 aaKnown RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 NAT1P18440 290 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 ACRV1P26436 265 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 DNAJA1P31689 397 aaKnown RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 HIBADHP31937 336 aaKnown RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 GJA4P35212 333 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 MEOX1P50221 254 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 ARID5AQ03989 594 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 HNRNPA0Q13151 305 aaKnown RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 NFYCQ13952 458 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 MAMDC4Q6UXC1 1216 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 LRRC47Q8N1G4 583 aaKnown RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 NEU4Q8WWR8 484 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-205ENST00000466171 DPYSL5Q9BPU6 564 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 PLA2G12BQ9BX93 195 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 CD244Q9BZW8 370 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 NELFAQ9H3P2 528 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 ST7Q9NRC1 585 aa3.67□□□□□ -1.82
CCDC93-205ENST00000466171 A0A087X1B8 175 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 AQP7O14520 342 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 GSTA4O15217 222 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 CYP27B1O15528 508 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 PTPN1P18031 435 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms