RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SLC12A3P55017 1021 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 IQCEQ6IPM2 695 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 CREG2Q8IUH2 290 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 RUSC1Q9BVN2 902 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 ARMCX3Q9UH62 379 aaPredicted RBP17.99■□□□□ 0.47
SLX4-202ENST00000466154 A0A087X0T9 212 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 EML1O00423 815 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 MSH4O15457 936 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 ONECUT3O60422 494 aaPredicted RBP17.99■□□□□ 0.47
SLX4-202ENST00000466154 FAM228BP0C875 321 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 CASP4P49662 377 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 ASIC2Q16515 512 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 ZCWPW2Q504Y3 356 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 COBLL1Q53SF7 1204 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 RDH13Q8NBN7 331 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 SPATA4Q8NEY3 305 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.99■□□□□ 0.473e-6■■■■■ 110.6
SLX4-202ENST00000466154 CEP72Q9P209 647 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 HYOU1Q9Y4L1 999 aa17.99■□□□□ 0.47
SLX4-202ENST00000466154 ESYT3A0FGR9 886 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 ANO9A1A5B4 782 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 C21orf2O43822 256 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 GIT2Q14161 759 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 TBC1D10BQ4KMP7 808 aaPredicted RBP17.98■□□□□ 0.47
SLX4-202ENST00000466154 DNAJC21Q5F1R6 531 aaKnown RBP17.98■□□□□ 0.47
SLX4-202ENST00000466154 STRIP1Q5VSL9 837 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 GJB7Q6PEY0 223 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 IFT81Q8WYA0 676 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 SELENOOQ9BVL4 669 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 LY75O60449 1722 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 RNF40O75150 1001 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 KLRC1P26715 233 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 HGSNATQ68CP4 663 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 MYCT1Q8N699 235 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 THSD7AQ9UPZ6 1657 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 TMCO5BA8MYB1 307 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 ZC2HC1CQ53FD0 456 aaPredicted RBP17.98■□□□□ 0.47
SLX4-202ENST00000466154 TRIM59Q8IWR1 403 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 TXLNBQ8N3L3 684 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 PROCA1Q8NCQ7 364 aaPredicted RBP17.98■□□□□ 0.47
SLX4-202ENST00000466154 ETNPPLQ8TBG4 499 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 NAP1L4Q99733 375 aaKnown RBP17.98■□□□□ 0.47
SLX4-202ENST00000466154 EHD4Q9H223 541 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 PRR12Q9ULL5 1215 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 ZBTB12Q9Y330 459 aaPredicted RBP17.98■□□□□ 0.47
SLX4-202ENST00000466154 RABGAP1Q9Y3P9 1069 aa17.98■□□□□ 0.47
SLX4-202ENST00000466154 SERPING1P05155 500 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 CDK17Q00537 523 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 ZSCAN26Q16670 478 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 WDR93Q6P2C0 686 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.97■□□□□ 0.47
SLX4-202ENST00000466154 EIF2AK1Q9BQI3 630 aaKnown RBP17.97■□□□□ 0.47
SLX4-202ENST00000466154 SH2D3AQ9BRG2 576 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 ZBTB21Q9ULJ3 1066 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 SPATA31C1P0DKV0 1188 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 XRCC5P13010 732 aaKnown RBP17.97■□□□□ 0.47
SLX4-202ENST00000466154 NMT1P30419 496 aaKnown RBP17.97■□□□□ 0.47
SLX4-202ENST00000466154 GGCXP38435 758 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 PURBQ96QR8 312 aaKnown RBP17.97■□□□□ 0.47
SLX4-202ENST00000466154 GLT8D2Q9H1C3 349 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 PCDHA2Q9Y5H9 948 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
SLX4-202ENST00000466154 FAM13AO94988 1023 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 HNRNPH3P31942 346 aaKnown RBP17.96■□□□□ 0.47
SLX4-202ENST00000466154 KNOP1Q1ED39 458 aaKnown RBP17.96■□□□□ 0.47
SLX4-202ENST00000466154 RBM12Q9NTZ6 932 aaKnown RBP17.96■□□□□ 0.47
SLX4-202ENST00000466154 SEPT11Q9NVA2 429 aaKnown RBP17.96■□□□□ 0.47
SLX4-202ENST00000466154 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 C8orf74Q6P047 294 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 LEKR1Q6ZMV7 388 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 CDAN1Q8IWY9 1227 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 CEP63Q96MT8 703 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 TMOD2Q9NZR1 351 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 ZSCAN5CA6NGD5 496 aaPredicted RBP17.96■□□□□ 0.47
SLX4-202ENST00000466154 AKAP3O75969 853 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 EXOC3L4Q17RC7 722 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 IQCDQ96DY2 449 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 DYDC2Q96IM9 177 aa17.96■□□□□ 0.47
SLX4-202ENST00000466154 MYH4Q9Y623 1939 aa17.96■□□□□ 0.46
SLX4-202ENST00000466154 MCM3P25205 808 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 POLD1P28340 1107 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 CYP2J2P51589 502 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 STAT2P52630 851 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 LRCH2Q5VUJ6 765 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 KLHL7Q8IXQ5 586 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 RPGRIP1Q96KN7 1286 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 TLR10Q9BXR5 811 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 HPCAL4Q9UM19 191 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 MYO3BQ8WXR4 1341 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 GNA14O95837 355 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 TCP1P17987 556 aaKnown RBP17.95■□□□□ 0.46
SLX4-202ENST00000466154 RPA1P27694 616 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 KLHDC7AQ5VTJ3 777 aa17.95■□□□□ 0.46
SLX4-202ENST00000466154 CCNI2Q6ZMN8 369 aaPredicted RBP17.95■□□□□ 0.46
SLX4-202ENST00000466154 MKL1Q969V6 931 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms