RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 KIF2CQ99661 725 aa8.25□□□□□ -1.09
RPUSD3-212ENST00000466141 RNF41Q9H4P4 317 aaPredicted RBP8.25□□□□□ -1.09
RPUSD3-212ENST00000466141 TRMT13Q9NUP7 481 aaKnown RBP8.25□□□□□ -1.09
RPUSD3-212ENST00000466141 CTNNA3Q9UI47 895 aa8.25□□□□□ -1.09
RPUSD3-212ENST00000466141 PRR12Q9ULL5 1215 aa8.25□□□□□ -1.09
RPUSD3-212ENST00000466141 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
RPUSD3-212ENST00000466141 BRWD1Q9NSI6 2320 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 LCHNA4D1U4 455 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 PRR33A8MZF0 331 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 B4E1Z4 1266 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 F5H6K3 240 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 ZNF213O14771 459 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 RANBP6O60518 1105 aaKnown RBP8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 SMPD1P17405 629 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 GSCP56915 257 aaPredicted RBP8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 NKX3-2P78367 333 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 KLRC3Q07444 240 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 E2F5Q15329 346 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 TMEM259Q4ZIN3 620 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 RRP12Q5JTH9 1297 aaKnown RBP8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 MFSD6Q6ZSS7 791 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 STOX1Q6ZVD7 989 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 FMNL3Q8IVF7 1028 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 TMC2Q8TDI7 906 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 ESR2Q92731 530 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 GMCL1Q96IK5 515 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 PDGFCQ9NRA1 345 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 TCP11L1Q9NUJ3 509 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 CLIP2Q9UDT6 1046 aa8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 RBM8AQ9Y5S9 174 aaKnown RBP8.24□□□□□ -1.09
RPUSD3-212ENST00000466141 SOWAHBA6NEL2 793 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 SOWAHDA6NJG2 315 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 CABYRO75952 493 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 S100BP04271 92 aaPredicted RBP8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 IL9P15248 144 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 MAN1A1P33908 653 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 TMED1Q13445 227 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 EEPD1Q7L9B9 569 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 HERC6Q8IVU3 1022 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 FBXO16Q8IX29 292 aaPredicted RBP8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 FAM178BQ8IXR5 827 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 LMNTD2Q8IXW0 634 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 GJD3Q8N144 294 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 PHOX2BQ99453 314 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 TACO1Q9BSH4 297 aaKnown RBP8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 AP5M1Q9H0R1 490 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 CNNM2Q9H8M5 875 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 PCDH12Q9NPG4 1184 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 TOMM22Q9NS69 142 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 STX8Q9UNK0 236 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 PTPRSQ13332 1948 aa8.23□□□□□ -1.09
RPUSD3-212ENST00000466141 ATP2A1O14983 1001 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 PRC1O43663 620 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 ZBED4O75132 1171 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 TOP1P11387 765 aaKnown RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 KCNA5P22460 613 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 SESN3P58005 492 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 ZNF394Q53GI3 561 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 SLFN13Q68D06 897 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 CYB5R4Q7L1T6 521 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 MB21D2Q8IYB1 491 aaPredicted RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 ENAHQ8N8S7 591 aaPredicted RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 PRPF38AQ8NAV1 312 aaKnown RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 DDX27Q96GQ7 796 aaKnown RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 SLC9A7Q96T83 725 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 NAP1L4Q99733 375 aaKnown RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 TMEM47Q9BQJ4 181 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 MMTAG2Q9BU76 263 aaKnown RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 KRT23Q9C075 422 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 ZSWIM4Q9H7M6 989 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 UBE2ZQ9H832 354 aaPredicted RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 SLC38A10Q9HBR0 1119 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 ANO2Q9NQ90 1003 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 ETAA1Q9NY74 926 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 TCEAL9Q9UHQ7 104 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 NOL7Q9UMY1 257 aaKnown RBP8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 TNKSO95271 1327 aa8.22□□□□□ -1.09
RPUSD3-212ENST00000466141 PALM3A6NDB9 673 aaPredicted RBP8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 E7EWF7 191 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 SLC27A2O14975 620 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 PFKMP08237 780 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 CCDC159P0C7I6 412 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 SNHG28P0DPA3 235 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 PDHBP11177 359 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 BMP3P12645 472 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 ACTN1P12814 892 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 HSD3B2P26439 372 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 ANTXR2P58335 489 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 TAGLNQ01995 201 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms